Xholon GWT 0.9.1
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A

A_BBCE - Static variable in interface org.primordion.user.app.petrinet.feinberg1.Cefeinberg1
 
A_CE - Static variable in interface org.primordion.xholon.common.mechanism.CeXBar
 
A_FPL_ACE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_FPL_BCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_FPL_CCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_FPL_DCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_FPL_ECE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_FPL_FCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_FPL_GCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_FPL_HCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_FPL_ICE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_FPL_LCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_FPL_NCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_FPL_RCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_FPL_SCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_FPL_TCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_FPL_WCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_FPL_XCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_FPL_YCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_FPL_ZCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_FPLCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
A_KetoglutarateCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
A_KetoglutarateCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
A_KetoglutarateDehydrogenaseCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
A_KetoglutarateDehydrogenaseCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
AaaCE - Static variable in interface org.primordion.user.app.TweenTrees.CeTweenTrees
 
about() - Method in class org.primordion.cellontro.app.AppCell
 
about() - Method in class org.primordion.cellontro.app.AppCellAutop
 
about() - Method in class org.primordion.cellontro.app.AppLife
 
about() - Method in class org.primordion.cellontro.app.sbml.AppSbml
 
about() - Method in class org.primordion.xholon.app.Application
 
about() - Method in interface org.primordion.xholon.app.IApplication
Display brief information about Xholon and the application.
About - Class in org.primordion.xholon.io
Display brief information about Xholon and the current Xholon application.
About() - Constructor for class org.primordion.xholon.io.About
 
about(String, String, int, int) - Method in class org.primordion.xholon.io.About
 
about(String, String, int, int) - Method in interface org.primordion.xholon.io.IAbout
Display information about the application.
AboutService - Class in org.primordion.xholon.service
A service that presents some simple information about the Xholon application that's currently running.
AboutService() - Constructor for class org.primordion.xholon.service.AboutService
 
AboutServiceCE - Static variable in interface org.primordion.xholon.common.mechanism.CeXholonService
 
absCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
AbsorbedByAtmosphereVCE - Static variable in interface org.primordion.user.app.climatechange.model04.Cemodel04
 
AbsorbedBySurfaceLwVCE - Static variable in interface org.primordion.user.app.climatechange.model04.Cemodel04
 
AbsorbedBySurfaceSwVCE - Static variable in interface org.primordion.user.app.climatechange.model04.Cemodel04
 
AbstractApplication - Class in org.primordion.xholon.app
This is an abstract marker class from which all Xholon applications should subclass.
AbstractApplication() - Constructor for class org.primordion.xholon.app.AbstractApplication
 
AbstractBorderCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
AbstractButtonCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
AbstractCellEditorCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
AbstractChartViewer - Class in org.primordion.xholon.io
This is the abstract superclass for concrete classes that capture data and display the data in a chart.
AbstractChartViewer() - Constructor for class org.primordion.xholon.io.AbstractChartViewer
 
AbstractDocumentCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
AbstractGrid - Class in org.primordion.xholon.base
AbstractGrid is an abstract class that your detailed behavior class (ex: XhGameOfLife) should extend if it contains a grid superimposed on some portion of the tree.
AbstractGrid() - Constructor for class org.primordion.xholon.base.AbstractGrid
Constructor.
AbstractHistogramViewer - Class in org.primordion.xholon.io
This is the abstract superclass for concrete classes that capture data and display the data in a histogram.
AbstractHistogramViewer() - Constructor for class org.primordion.xholon.io.AbstractHistogramViewer
 
AbstractListModelCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
AbstractSpinnerModelCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
AbstractSwingModelCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
AbstractTableModelCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
AbstractTimelineViewer - Class in org.primordion.xholon.service.timeline
This is the abstract superclass for concrete classes that capture data and display the data in a timeline.
AbstractTimelineViewer() - Constructor for class org.primordion.xholon.service.timeline.AbstractTimelineViewer
 
AbstractTreeProcessor - Class in org.primordion.xholon.service.processor
An abstract base class for TreeProcessor classes.
AbstractTreeProcessor() - Constructor for class org.primordion.xholon.service.processor.AbstractTreeProcessor
 
AbstractVrmlColor - Class in org.primordion.xholon.io.vrml
VRML VrmlColor.
AbstractVrmlColor() - Constructor for class org.primordion.xholon.io.vrml.AbstractVrmlColor
 
AbstractVrmlWriter - Class in org.primordion.xholon.io.vrml
VRML Writer.
AbstractVrmlWriter() - Constructor for class org.primordion.xholon.io.vrml.AbstractVrmlWriter
Constructor.
AbstractXholon2Cytojs - Class in org.primordion.ef.cytojs
Abstract superclass for Cytoscape.js formats.
AbstractXholon2Cytojs() - Constructor for class org.primordion.ef.cytojs.AbstractXholon2Cytojs
 
AbstractXholon2Cytojs(String, String) - Constructor for class org.primordion.ef.cytojs.AbstractXholon2Cytojs
 
AbstractXholon2ExternalFormat - Class in org.primordion.ef
Abstract superclass for classes that write Xholon subtrees to external formats.
AbstractXholon2ExternalFormat() - Constructor for class org.primordion.ef.AbstractXholon2ExternalFormat
Constructor.
AbstractXholon2Threejs - Class in org.primordion.ef.threejs
Generate and display a threejs scene.
AbstractXholon2Threejs() - Constructor for class org.primordion.ef.threejs.AbstractXholon2Threejs
 
AbstractXholonGui - Class in org.primordion.xholon.io
Abstract base class for Xholon Gui implementations.
AbstractXholonGui() - Constructor for class org.primordion.xholon.io.AbstractXholonGui
Constructor.
AbstractXholonService - Class in org.primordion.xholon.service
An abstract base class that can be extended to build concrete services.
AbstractXholonService() - Constructor for class org.primordion.xholon.service.AbstractXholonService
 
AbstractXml2Xholon_gwt - Class in org.primordion.xholon.io.xml
Abstract class for transforming XML to Xholon, for GWT.
AbstractXml2Xholon_gwt() - Constructor for class org.primordion.xholon.io.xml.AbstractXml2Xholon_gwt
 
AbstractXPath - Class in org.primordion.xholon.base
Abstract base class for XPath implementations used in Xholon.
AbstractXPath() - Constructor for class org.primordion.xholon.base.AbstractXPath
 
AC_DCE - Static variable in interface org.primordion.user.app.petrinet.feinberg1.Cefeinberg1
 
AcAldCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
ACarbonCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
acceleration - Variable in class org.primordion.dynsys.app.XhTrain
 
AccelerationCE - Static variable in interface org.primordion.ealontro.app.CartCentering.CeCartCentering
 
AcceptCallActionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
AcceptEventActionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
ACE - Static variable in interface org.primordion.cellontro.app.sbml.CeBrusselator
 
aCE - Static variable in interface org.primordion.memcomp.app.CoopPSys00ex0.CeCoopPSys00ex0
 
aCE - Static variable in interface org.primordion.memcomp.app.CoopSys02ex32_1.CeCoopSys02ex32_1
 
aCE - Static variable in interface org.primordion.memcomp.app.CoopSys02ex343_1.CeCoopSys02ex343_1
 
aCE - Static variable in interface org.primordion.memcomp.app.CoopSys02ex343_2.CeCoopSys02ex343_2
 
aCE - Static variable in interface org.primordion.memcomp.app.Fsm06ex1.CeFsm06ex1
 
aCE - Static variable in interface org.primordion.memcomp.app.SymAnti02ex41.CeSymAnti02ex41
 
ACE - Static variable in interface org.primordion.user.app.petrinet.feinberg1.Cefeinberg1
 
ACE - Static variable in interface org.primordion.xholon.common.mechanism.CeXBar
 
AcetateCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AcetylcholinesteraseCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AcetylCoACE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AcetylCoACE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
aChar - Variable in class org.primordion.user.xmiapps.TestFsm.XhTestFsm
 
AcmeWatchCE - Static variable in interface org.primordion.user.xmiapps.Watch.CeWatch
 
AconitaseCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AconitaseCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
act() - Method in class org.primordion.cellontro.app.sbml.XhBrusselator
 
act() - Method in class org.primordion.cellontro.app.sbml.XhCellModel
 
act() - Method in class org.primordion.cellontro.app.sbml.XhCircadianClock
 
act() - Method in class org.primordion.cellontro.app.sbml.XhDimericMWCstiff
 
act() - Method in class org.primordion.cellontro.app.sbml.XhGlycolysis
 
act() - Method in class org.primordion.cellontro.app.sbml.XhYeastGlyPritchardKel
 
act() - Method in class org.primordion.cellontro.app.XhCell
 
act() - Method in class org.primordion.cellontro.app.XhCellAutop
 
act() - Method in class org.primordion.cellontro.app.XhLife
 
act() - Method in class org.primordion.ctrnn.AdapSysLab.XhAdapSysLab
 
act() - Method in class org.primordion.dynsys.app.leakybucket.Outflow
 
act() - Method in class org.primordion.dynsys.app.leakybucket.Water
 
act() - Method in class org.primordion.dynsys.app.stability.Ball
 
act() - Method in class org.primordion.dynsys.app.stability.BallView
 
act() - Method in class org.primordion.dynsys.app.XhFibonacci
 
act() - Method in class org.primordion.dynsys.app.XhGravity1
 
act() - Method in class org.primordion.dynsys.app.XhInterest
 
act() - Method in class org.primordion.dynsys.app.XhScheffranNActor
 
act() - Method in class org.primordion.dynsys.app.XhScheffranTwoActor
 
act() - Method in class org.primordion.dynsys.app.XhTrain
 
act() - Method in class org.primordion.ealontro.app.AntForaging.XhAntForaging
 
act() - Method in class org.primordion.ealontro.app.CartCentering.XhCartCentering
 
act() - Method in class org.primordion.ealontro.app.EcjAntTrail.XhAntTrail
 
act() - Method in class org.primordion.ealontro.app.EcjTutorial4.XhTutorial4
 
act() - Method in class org.primordion.memcomp.app.BraneCalc1.XhBraneCalc1
 
act() - Method in class org.primordion.memcomp.app.CoopPSys00ex0.XhCoopPSys00ex0
 
act() - Method in class org.primordion.memcomp.app.CoopSys02ex32_1.XhCoopSys02ex32_1
 
act() - Method in class org.primordion.memcomp.app.CoopSys02ex343_1.XhCoopSys02ex343_1
 
act() - Method in class org.primordion.memcomp.app.CoopSys02ex343_2.XhCoopSys02ex343_2
 
act() - Method in class org.primordion.memcomp.app.Fsm06ex1.XhFsm06ex1
 
act() - Method in class org.primordion.memcomp.app.Fsm06ex1_Fsm.XhFsm06ex1_Fsm
 
act() - Method in class org.primordion.memcomp.app.SymAnti02ex41.XhSymAnti02ex41
 
act() - Method in class org.primordion.user.app.azimuth.pn01.Xhpn
 
act() - Method in class org.primordion.user.app.Bestiary.FreedomOfMovementCatbehavior
 
act() - Method in class org.primordion.user.app.Bestiary.GraphingBeastbehavior
 
act() - Method in class org.primordion.user.app.Bestiary.GreetingHumanbehavior
 
act() - Method in class org.primordion.user.app.Bestiary.GrowingCatbehavior
 
act() - Method in class org.primordion.user.app.Bestiary.HabitatCellBestiary
 
act() - Method in class org.primordion.user.app.Bestiary.IntegralBeast
 
act() - Method in class org.primordion.user.app.Bestiary.MovingBeastBehavior
 
act() - Method in class org.primordion.user.app.Bestiary.QueueBestiary
 
act() - Method in class org.primordion.user.app.Bestiary.SleepingCatbehavior
 
act() - Method in class org.primordion.user.app.bigraph.roomsghosts.Xhroomsghosts
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.Death
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.Decay
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.DissolvedOrgCarbToOcean
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.Downwelling
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.GasExchangeDown
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.GasExchangeUp
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.GlobalCarbonEmissions
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.LandUseChange
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.MarineBiotaToDissolvedOrgCarb
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.MarineDetritus
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.MarinePhotosynthesis
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.MarineRespiration
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.Photosynthesis
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.Respiration
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.Sedimentation
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.Upwelling
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.VegToOcean
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.Weathering
 
act() - Method in class org.primordion.user.app.climatechange.carboncycle03.Xhcarboncycle03
 
act() - Method in class org.primordion.user.app.climatechange.igm.DownLw
 
act() - Method in class org.primordion.user.app.climatechange.igm.FromSurfaceLw
 
act() - Method in class org.primordion.user.app.climatechange.igm.ReflectedSw
 
act() - Method in class org.primordion.user.app.climatechange.igm.SolarInputSw
 
act() - Method in class org.primordion.user.app.climatechange.igm.Temperature
 
act() - Method in class org.primordion.user.app.climatechange.igm.ThruAtmosLw
 
act() - Method in class org.primordion.user.app.climatechange.igm.UpLw
 
act() - Method in class org.primordion.user.app.climatechange.igm.Xhigm
 
act() - Method in class org.primordion.user.app.climatechange.mdcs.m2_1mp.Surface
 
act() - Method in class org.primordion.user.app.climatechange.mdcs.m2_1mp.Xhmdcs
 
act() - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.Atmosphere
 
act() - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.RobinsonViewable
 
act() - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.RobinsonViewables
 
act() - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.SolarVariationAO
 
act() - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.SunspotCycleAO
 
act() - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.Surface
 
act() - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.TopOfAtmosphere
 
act() - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.Xhmdcs
 
act() - Method in class org.primordion.user.app.climatechange.model04.Atmosphere
 
act() - Method in class org.primordion.user.app.climatechange.model04.AtmosphericAlbedoAO
 
act() - Method in class org.primordion.user.app.climatechange.model04.AveragerAO
 
act() - Method in class org.primordion.user.app.climatechange.model04.CarbonDioxide
 
act() - Method in class org.primordion.user.app.climatechange.model04.Cfc11
 
act() - Method in class org.primordion.user.app.climatechange.model04.Cfc12
 
act() - Method in class org.primordion.user.app.climatechange.model04.Methane
 
act() - Method in class org.primordion.user.app.climatechange.model04.NitrousOxide
 
act() - Method in class org.primordion.user.app.climatechange.model04.OtherGhg
 
act() - Method in class org.primordion.user.app.climatechange.model04.SolarVariationAO
 
act() - Method in class org.primordion.user.app.climatechange.model04.Space
 
act() - Method in class org.primordion.user.app.climatechange.model04.Sun
 
act() - Method in class org.primordion.user.app.climatechange.model04.SunspotCycleAO
 
act() - Method in class org.primordion.user.app.climatechange.model04.Surface
 
act() - Method in class org.primordion.user.app.climatechange.model04.SurfaceAlbedoAO
 
act() - Method in class org.primordion.user.app.climatechange.model04.TopOfAtmosphere
 
act() - Method in class org.primordion.user.app.climatechange.model04.Xhmodel04
 
act() - Method in class org.primordion.user.app.climatechange.solarsystemtest.Xhsolarsystemtest
 
act() - Method in class org.primordion.user.app.Collisions.XhCollisions
 
act() - Method in class org.primordion.user.app.English2French.XhEnglish2French
 
act() - Method in class org.primordion.user.app.GameOfLife.XhGameOfLife
 
act() - Method in class org.primordion.user.app.Generic.XhGeneric
 
act() - Method in class org.primordion.user.app.HelloWorld_TestTime.XhHelloWorld_TestTime
 
act() - Method in class org.primordion.user.app.helloworldjnlp.XhHelloWorld
 
act() - Method in class org.primordion.user.app.Hex.Monster
 
act() - Method in class org.primordion.user.app.Hex.XhHex
 
act() - Method in class org.primordion.user.app.mathmltest1.XhTest1
 
act() - Method in class org.primordion.user.app.MeTTTa.XhMeTTTa
 
act() - Method in class org.primordion.user.app.OrNode.XhOrNodeSample
 
act() - Method in class org.primordion.user.app.petrinet.feinberg1.Xhfeinberg1
 
act() - Method in class org.primordion.user.app.PingPong.XhPingPong
 
act() - Method in class org.primordion.user.app.RavaszHnm.XhRavaszHnm
 
act() - Method in class org.primordion.user.app.rcs.Rcs1.XhRcs1
 
act() - Method in class org.primordion.user.app.rcs.Rcs2.XhRcs2
 
act() - Method in class org.primordion.user.app.Red.XhRed
 
act() - Method in class org.primordion.user.app.Risk.XhRisk
 
act() - Method in class org.primordion.user.app.Simple1d.Xh1dSimple
 
act() - Method in class org.primordion.user.app.solarsystem.Star
 
act() - Method in class org.primordion.user.app.solarsystem.SunspotCycleAO
 
act() - Method in class org.primordion.user.app.SpatialGames.Xh09SpatialGames
 
act() - Method in class org.primordion.user.app.SpringIdol.Instrumentalist
 
act() - Method in class org.primordion.user.app.SpringIdol.OneManBand
 
act() - Method in class org.primordion.user.app.SpringIdol.PoeticJuggler
 
act() - Method in class org.primordion.user.app.StupidModel.sm1.BugStupidModel1
 
act() - Method in class org.primordion.user.app.StupidModel.sm10.BugStupidModel10
 
act() - Method in class org.primordion.user.app.StupidModel.sm10.HabitatCellStupidModel10
 
act() - Method in class org.primordion.user.app.StupidModel.sm10.QueueStupidModel10
 
act() - Method in class org.primordion.user.app.StupidModel.sm10.XhStupidModel10
 
act() - Method in class org.primordion.user.app.StupidModel.sm11.BugStupidModel11
 
act() - Method in class org.primordion.user.app.StupidModel.sm11.HabitatCellStupidModel11
 
act() - Method in class org.primordion.user.app.StupidModel.sm11.QueueStupidModel11
 
act() - Method in class org.primordion.user.app.StupidModel.sm11.XhStupidModel11
 
act() - Method in class org.primordion.user.app.StupidModel.sm12.BugStupidModel12
 
act() - Method in class org.primordion.user.app.StupidModel.sm12.HabitatCellStupidModel12
 
act() - Method in class org.primordion.user.app.StupidModel.sm12.QueueStupidModel12
 
act() - Method in class org.primordion.user.app.StupidModel.sm12.XhStupidModel12
 
act() - Method in class org.primordion.user.app.StupidModel.sm13.BugStupidModel13
 
act() - Method in class org.primordion.user.app.StupidModel.sm13.HabitatCellStupidModel13
 
act() - Method in class org.primordion.user.app.StupidModel.sm13.QueueStupidModel13
 
act() - Method in class org.primordion.user.app.StupidModel.sm13.XhStupidModel13
 
act() - Method in class org.primordion.user.app.StupidModel.sm14.BugStupidModel14
 
act() - Method in class org.primordion.user.app.StupidModel.sm14.HabitatCellStupidModel14
 
act() - Method in class org.primordion.user.app.StupidModel.sm14.QueueStupidModel14
 
act() - Method in class org.primordion.user.app.StupidModel.sm14.XhStupidModel14
 
act() - Method in class org.primordion.user.app.StupidModel.sm15.BugStupidModel15
 
act() - Method in class org.primordion.user.app.StupidModel.sm15.HabitatCellStupidModel15
 
act() - Method in class org.primordion.user.app.StupidModel.sm15.QueueStupidModel15
 
act() - Method in class org.primordion.user.app.StupidModel.sm15.XhStupidModel15
 
act() - Method in class org.primordion.user.app.StupidModel.sm16.BugStupidModel16
 
act() - Method in class org.primordion.user.app.StupidModel.sm16.HabitatCellStupidModel16
 
act() - Method in class org.primordion.user.app.StupidModel.sm16.QueueStupidModel16
 
act() - Method in class org.primordion.user.app.StupidModel.sm16.XhStupidModel16
 
act() - Method in class org.primordion.user.app.StupidModel.sm16nl.BugStupidModel16nl
 
act() - Method in class org.primordion.user.app.StupidModel.sm16nl.HabitatCellStupidModel16nl
 
act() - Method in class org.primordion.user.app.StupidModel.sm16nl.QueueStupidModel16nl
 
act() - Method in class org.primordion.user.app.StupidModel.sm16nl.XhStupidModel16nl
 
act() - Method in class org.primordion.user.app.StupidModel.sm2.BugStupidModel2
 
act() - Method in class org.primordion.user.app.StupidModel.sm3.BugStupidModel3
 
act() - Method in class org.primordion.user.app.StupidModel.sm3.HabitatCellStupidModel3
 
act() - Method in class org.primordion.user.app.StupidModel.sm4.BugStupidModel4
 
act() - Method in class org.primordion.user.app.StupidModel.sm4.HabitatCellStupidModel4
 
act() - Method in class org.primordion.user.app.StupidModel.sm5.BugStupidModel5
 
act() - Method in class org.primordion.user.app.StupidModel.sm5.HabitatCellStupidModel5
 
act() - Method in class org.primordion.user.app.StupidModel.sm5tg.BugStupidModel5tg
 
act() - Method in class org.primordion.user.app.StupidModel.sm5tg.HabitatCellStupidModel5tg
 
act() - Method in class org.primordion.user.app.StupidModel.sm6.BugStupidModel6
 
act() - Method in class org.primordion.user.app.StupidModel.sm6.HabitatCellStupidModel6
 
act() - Method in class org.primordion.user.app.StupidModel.sm7.BugStupidModel7
 
act() - Method in class org.primordion.user.app.StupidModel.sm7.HabitatCellStupidModel7
 
act() - Method in class org.primordion.user.app.StupidModel.sm8.BugStupidModel8
 
act() - Method in class org.primordion.user.app.StupidModel.sm8.HabitatCellStupidModel8
 
act() - Method in class org.primordion.user.app.StupidModel.sm8.XhStupidModel8
 
act() - Method in class org.primordion.user.app.StupidModel.sm9.BugStupidModel9
 
act() - Method in class org.primordion.user.app.StupidModel.sm9.HabitatCellStupidModel9
 
act() - Method in class org.primordion.user.app.StupidModel.sm9.QueueStupidModel9
 
act() - Method in class org.primordion.user.app.StupidModel.sm9.XhStupidModel9
 
act() - Method in class org.primordion.user.app.TestFsm.XhTestFsmKW
 
act() - Method in class org.primordion.user.app.testNodePorts.XhtestNodePorts
 
act() - Method in class org.primordion.user.app.Turnstile.XhTurnstile
 
act() - Method in class org.primordion.user.app.TurtleExample1.XhTurtleExample1
 
act() - Method in class org.primordion.user.app.TweenTrees.XhTweenTrees
 
act() - Method in class org.primordion.user.app.WaterLogic.XhWaterLogic
 
act() - Method in class org.primordion.user.app.WolfSheepGrass.Grass
 
act() - Method in class org.primordion.user.app.WolfSheepGrass.WolfSheep
 
act() - Method in class org.primordion.user.app.WolfSheepGrass.XhWolfSheepGrass
 
act() - Method in class org.primordion.user.app.XBar.XhXBar_ex1
 
act() - Method in class org.primordion.user.xmiapps.__XholonTemplate__.Xh__XholonTemplate__
 
act() - Method in class org.primordion.user.xmiapps.beard41.XhBeard2005_UML_Xholon_Step4_v1
 
act() - Method in class org.primordion.user.xmiapps.Elevator.XhElevator
 
act() - Method in class org.primordion.user.xmiapps.Fsm06ex1_Fsm.XhFsm06ex1_Fsm
 
act() - Method in class org.primordion.user.xmiapps.HelloWorldTutorial.XhHelloWorldTutorial
 
act() - Method in class org.primordion.user.xmiapps.HelloWorldTutorial_multiWorld.XhHelloWorldTutorial_multiWorld
 
act() - Method in class org.primordion.user.xmiapps.HelloWorldTutorial_plus.XhHelloWorldTutorial_plus
 
act() - Method in class org.primordion.user.xmiapps.HelloWorldTutorial_universe.XhHelloWorldTutorial_universe
 
act() - Method in class org.primordion.user.xmiapps.ProvidedRequiredTest.XhProvidedRequiredTest
 
act() - Method in class org.primordion.user.xmiapps.Rcs_GP_FSM.XhRcs_GP_FSM
 
act() - Method in class org.primordion.user.xmiapps.Rcs_GP_FSM_Grid.XhRcs_GP_FSM_Grid
 
act() - Method in class org.primordion.user.xmiapps.Rcs_GP_MM.XhRcs_GP_MM
 
act() - Method in class org.primordion.user.xmiapps.Rcs_GP_MM_NoSymbols.XhRcs_GP_MM_NoSymbols
 
act() - Method in class org.primordion.user.xmiapps.StopWatch.XhStopWatch
 
act() - Method in class org.primordion.user.xmiapps.StopWatch_Xhym.XhStopWatch_Xhym
 
act() - Method in class org.primordion.user.xmiapps.TestFsm.XhTestFsm
 
act() - Method in class org.primordion.user.xmiapps.TestFsmForkJoin.XhTestFsmForkJoin
 
act() - Method in class org.primordion.user.xmiapps.TestFsmHistory.XhTestFsmHistory
 
act() - Method in class org.primordion.user.xmiapps.TestFsmJunction.XhTestFsmJunction
 
act() - Method in class org.primordion.user.xmiapps.TestFsmOrthogonal.XhTestFsmOrthogonal
 
act() - Method in class org.primordion.user.xmiappsTc.HelloWorldTutorial.XhHelloWorldTutorial
 
act() - Method in class org.primordion.user.xmiappsTc.StateMachineOnly.XhStateMachineOnly
 
act() - Method in class org.primordion.user.xmiappsTcSysML.XhHelloWorldTutorialSysML
 
act() - Method in class org.primordion.xholon.app.Chameleon.XhChameleon
 
act() - Method in class org.primordion.xholon.app.Furcifer.FurciferAll
 
act() - Method in class org.primordion.xholon.base.Behavior_gwtjs
 
act() - Method in class org.primordion.xholon.base.Control
Most Control nodes do not need to do something every timeStep.
act() - Method in interface org.primordion.xholon.base.IXholon
Do some action during this time step.
act() - Method in class org.primordion.xholon.base.OrNode
 
act() - Method in class org.primordion.xholon.base.StateMachineEntity
 
act() - Method in class org.primordion.xholon.base.Xholon
 
act() - Method in class org.primordion.xholon.mech.petrinet.grid.FiringTransitionBehavior
 
act() - Method in class org.primordion.xholon.mech.petrinet.grid.GridOwner
 
act() - Method in class org.primordion.xholon.mech.petrinet.grid.MovingBehavior
 
act() - Method in class org.primordion.xholon.mech.petrinet.grid.QueueNodesInGrid
 
act() - Method in class org.primordion.xholon.mech.petrinet.QueueTransitions
 
act() - Method in class org.primordion.xholon.service.AbstractXholonService
 
act() - Method in class org.primordion.xholon.service.svg.SvgClient
 
act() - Method in class org.primordion.xholon.service.svg.SvgViewable
 
act() - Method in class org.primordion.xholon.service.svg.SvgViewBrowser
 
act() - Method in class org.primordion.xholon.util.XholonSortedNode
 
act() - Method in class org.primordion.xholon.util.XholonTreeNode
 
action() - Method in class org.fr.lri.swingstates.sm.Transition
Method called when this transition is fired.
ACTION_COPY_TOCLIPBOARD - Static variable in interface org.primordion.xholon.base.ISignal
copyToClipboard
ACTION_CUT_TOCLIPBOARD - Static variable in interface org.primordion.xholon.base.ISignal
cutToClipboard
ACTION_PASTE_AFTER_FROMCLIPBOARD - Static variable in interface org.primordion.xholon.base.ISignal
pasteAfterFromClipboard
ACTION_PASTE_AFTER_FROMDROP - Static variable in interface org.primordion.xholon.base.ISignal
pasteAfterFromDrop
ACTION_PASTE_AFTER_FROMSTRING - Static variable in interface org.primordion.xholon.base.ISignal
pasteAfterFromString
ACTION_PASTE_BEFORE_FROMCLIPBOARD - Static variable in interface org.primordion.xholon.base.ISignal
pasteBeforeFromClipboard
ACTION_PASTE_BEFORE_FROMSTRING - Static variable in interface org.primordion.xholon.base.ISignal
pasteBeforeFromString
ACTION_PASTE_FIRSTCHILD_FROMCLIPBOARD - Static variable in interface org.primordion.xholon.base.ISignal
pasteFirstChildFromClipboard
ACTION_PASTE_FIRSTCHILD_FROMDROP - Static variable in interface org.primordion.xholon.base.ISignal
pasteFirstChildFromDrop
ACTION_PASTE_FIRSTCHILD_FROMSTRING - Static variable in interface org.primordion.xholon.base.ISignal
pasteFirstChildFromString
ACTION_PASTE_LASTCHILD_FROMCLIPBOARD - Static variable in interface org.primordion.xholon.base.ISignal
pasteLastChildFromClipboard
ACTION_PASTE_LASTCHILD_FROMDROP - Static variable in interface org.primordion.xholon.base.ISignal
pasteLastChildFromDrop
ACTION_PASTE_LASTCHILD_FROMSTRING - Static variable in interface org.primordion.xholon.base.ISignal
pasteLastChildFromString
ACTION_PASTE_MERGE_FROMCLIPBOARD - Static variable in interface org.primordion.xholon.base.ISignal
pasteMergeFromClipboard
ACTION_PASTE_MERGE_FROMSTRING - Static variable in interface org.primordion.xholon.base.ISignal
pasteMergeFromString
ACTION_PASTE_REPLACEMENT_FROMCLIPBOARD - Static variable in interface org.primordion.xholon.base.ISignal
pasteReplacementFromClipboard
ACTION_PASTE_REPLACEMENT_FROMSTRING - Static variable in interface org.primordion.xholon.base.ISignal
pasteReplacementFromString
ACTION_START_WEB_BROWSER - Static variable in interface org.primordion.xholon.base.ISignal
Start an instance of the Xholon Web Browser.
ACTION_START_XHOLON_CONSOLE - Static variable in interface org.primordion.xholon.base.ISignal
Start an instance of the Xholon Console.
ACTION_START_XQUERY_GUI - Static variable in interface org.primordion.xholon.base.ISignal
Start an instance of the XQuery GUI.
ACTION_XQUERY_THRUCLIPBOARD - Static variable in interface org.primordion.xholon.base.ISignal
xqueryThruClipboard
ActionCE - Static variable in interface org.primordion.memcomp.app.BraneCalc1.CeBraneCalc1
 
ActionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAction
 
ActionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
ActionInputPinCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
ActionListCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAction
 
activated - Variable in class org.primordion.xholon.service.AbstractXholonService
Whether or not this service has been activated.
activation - Variable in class org.primordion.ctrnn.AdapSysLab.XhAbstractCtrnn
 
Activity - Class in org.primordion.xholon.base
An activity is a type of behavior.
Activity() - Constructor for class org.primordion.xholon.base.Activity
Constructor.
ACTIVITY_5 - Static variable in class org.primordion.user.app.TestFsm.XhTestFsmKW
 
ActivityCE - Static variable in interface org.primordion.xholon.common.mechanism.CeStateMachineEntity
 
ActivityEdgeCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActivityEntity
 
ActivityFinalNodeCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActivityEntity
 
ActivityGroupCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActivityEntity
 
ACTIVITYID_NONE - Static variable in class org.primordion.xholon.base.StateMachineEntity
 
ActivityNodeCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActivityEntity
 
ActivityParameterNodeCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActivityEntity
 
ActivityPartitionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActivityEntity
 
actNr() - Method in interface org.primordion.xholon.base.IXholon
Do some action during this time step.
actNr() - Method in class org.primordion.xholon.base.Xholon
 
actNr() - Method in class org.primordion.xholon.mech.petrinet.Transition
This method is intended to be called by QueueTransitions.
ActorCE - Static variable in interface org.primordion.dynsys.app.CeScheffranNActor
 
ActorCE - Static variable in interface org.primordion.dynsys.app.CeScheffranTwoActor
 
add(Object) - Method in class org.primordion.xholon.base.XholonList
The object added to the list must implement IXholon.
add(int, Object) - Method in class org.primordion.xholon.base.XholonList
 
add(Widget, Widget) - Method in class org.primordion.xholon.io.ScrolledTabLayoutPanel
 
add(Object) - Method in class org.primordion.xholon.util.XholonSortedNode
 
addAll(Collection) - Method in class org.primordion.xholon.base.XholonList
All elements in the Collection must implement IXholon.
addAll(int, Collection) - Method in class org.primordion.xholon.base.XholonList
 
addAll(Collection) - Method in class org.primordion.xholon.util.XholonSortedNode
 
addMessage(IMessage) - Method in interface org.primordion.xholon.base.IInteraction
Add a message to the interaction.
addMessage(int, Object, IXholon, IXholon, int) - Method in interface org.primordion.xholon.base.IInteraction
Add a message to the interaction.
addMessage(IMessage) - Method in class org.primordion.xholon.base.Interaction
 
addMessage(int, Object, IXholon, IXholon, int) - Method in class org.primordion.xholon.base.Interaction
 
addObserver(IXholon) - Method in interface org.primordion.xholon.base.IObservable
Adds an observer to the set of observers for this object.
addObserver(IXholon) - Method in class org.primordion.xholon.base.ObservableStateMachineEntity
 
addObserver(IXholon) - Method in class org.primordion.xholon.base.ObservableXholonWithPorts
 
addState(IStateMachineEntity) - Method in interface org.primordion.xholon.base.IInteraction
Add a state to the sequence diagram, but only if getShowStates() == true.
addState(IStateMachineEntity) - Method in class org.primordion.xholon.base.Interaction
 
AddStructuralFeatureValueActionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
addSyncMessage(IMessage) - Method in interface org.primordion.xholon.base.IInteraction
Add a Synchronous message to the interaction.
addSyncMessage(IMessage) - Method in class org.primordion.xholon.base.Interaction
 
addTab(Object, String, String, boolean) - Static method in class org.primordion.xholon.io.XholonGwtTabPanelHelper
Add a tab to the TabLayoutPanel.
addTransition(Transition) - Method in class org.fr.lri.swingstates.sm.State
Adds a transition to this state.
AddVariableValueActionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
addViewBehavior(String) - Method in class org.primordion.xholon.service.svg.SvgClient
Add a new view behavior.
AdenCE - Static variable in interface org.primordion.user.xmiapps.Rcs_GP_MM.CeRcs_GP_MM
 
AdenCE - Static variable in interface org.primordion.user.xmiapps.Rcs_GP_MM_NoSymbols.CeRcs_GP_MM_NoSymbols
 
AdenineCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AdenosineCE - Static variable in interface org.primordion.user.app.rcs.Rcs2.CeRcs2
 
ADHCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
adjustOptions(String, String, IXholon, String) - Method in class org.primordion.ef.AbstractXholon2ExternalFormat
Allow user to change the values of options for this external format writer.
adjustOptions(String, String, IXholon, String) - Method in class org.primordion.ef.Xholon2Svg
 
adjustOptions(String, String, IXholon, String) - Method in interface org.primordion.xholon.service.ef.IXholon2ExternalFormat
Allow user to change the values of options for this external format writer.
adjustOptionsNative(String, String, IXholon, String) - Method in class org.primordion.ef.AbstractXholon2ExternalFormat
Allow user to change the values of options for this external format writer.
adjustOptionsNative(String, String, IXholon, String) - Method in class org.primordion.ef.Xholon2Svg
Allow user to change the values of options for this external format writer.
adjustRawFitness() - Method in class org.primordion.ealontro.app.AntForaging.XhAntForaging
Adjust the fitness.
ADPCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
AdpCE - Static variable in interface org.primordion.user.app.rcs.Rcs2.CeRcs2
 
ADPCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
AdpCE - Static variable in interface org.primordion.user.xmiapps.Rcs_GP_MM.CeRcs_GP_MM
 
ADPfCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
ADPmCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
Adv_CE - Static variable in interface org.primordion.xholon.common.mechanism.CeXBar
 
AdvCE - Static variable in interface org.primordion.xholon.common.mechanism.CeXBar
 
AdvPCE - Static variable in interface org.primordion.xholon.common.mechanism.CeXBar
 
AfferentCentralNeuronCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AgentSet - Class in org.primordion.xholon.base
An agent set is a collection whose elements are always in random order.
AgentSet() - Constructor for class org.primordion.xholon.base.AgentSet
 
AgentSet(int) - Constructor for class org.primordion.xholon.base.AgentSet
 
AgentSet(Collection) - Constructor for class org.primordion.xholon.base.AgentSet
 
Aggregate - Static variable in class org.primordion.user.xmiapps.Rcs_GP_FSM_Grid.XhRcs_GP_FSM_Grid
 
aggregate(double) - Method in interface org.primordion.xholon.base.IPatch
Aggregate by keeping a count of the number of individuals of a given type of Patch.
aggregate(double) - Method in interface org.primordion.xholon.base.ITurtle
Aggregate by keeping a count of the number of individuals of a given "breed".
aggregate(double) - Method in class org.primordion.xholon.base.Patch
 
aggregate(double) - Method in class org.primordion.xholon.base.Turtle
 
Aggregator_G1PCE - Static variable in interface org.primordion.user.xmiapps.Rcs_GP_FSM_Grid.CeRcs_GP_FSM_Grid
 
Aggregator_GlcCE - Static variable in interface org.primordion.user.xmiapps.Rcs_GP_FSM_Grid.CeRcs_GP_FSM_Grid
 
AggregatorCE - Static variable in interface org.primordion.user.app.Bestiary.CeBestiary
 
AggregatorCE - Static variable in interface org.primordion.user.app.StupidModel.sm10.CeStupidModel10
 
AggregatorCE - Static variable in interface org.primordion.user.app.StupidModel.sm11.CeStupidModel11
 
AggregatorCE - Static variable in interface org.primordion.user.app.StupidModel.sm12.CeStupidModel12
 
AggregatorCE - Static variable in interface org.primordion.user.app.StupidModel.sm13.CeStupidModel13
 
AggregatorCE - Static variable in interface org.primordion.user.app.StupidModel.sm14.CeStupidModel14
 
AggregatorCE - Static variable in interface org.primordion.user.app.StupidModel.sm15.CeStupidModel15
 
AggregatorCE - Static variable in interface org.primordion.user.app.StupidModel.sm16.CeStupidModel16
 
AggregatorCE - Static variable in interface org.primordion.user.app.StupidModel.sm16nl.CeStupidModel16nl
 
AggregatorCE - Static variable in interface org.primordion.user.app.StupidModel.sm8.CeStupidModel8
 
AggregatorCE - Static variable in interface org.primordion.user.app.StupidModel.sm9.CeStupidModel9
 
AggregatorCE - Static variable in interface org.primordion.user.app.WolfSheepGrass.CeWolfSheepGrass
 
AggregatorCE - Static variable in interface org.primordion.user.xmiapps.Rcs_GP_FSM_Grid.CeRcs_GP_FSM_Grid
 
AKCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
AKCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
AlaCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AlarmChimeCE - Static variable in interface org.primordion.user.xmiapps.Watch.CeWatch
 
AlarmChimeStatusDisplayCE - Static variable in interface org.primordion.user.xmiapps.Watch.CeWatch
 
AlcoholDehydrogenaseCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
ALDCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
AldolaseCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AldolaseCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
alive - Variable in class org.primordion.user.app.GameOfLife.XhGameOfLife
 
alive - Variable in class org.primordion.user.app.Hex.XhHex
 
alive - Variable in class org.primordion.user.app.Simple1d.Xh1dSimple
 
ALLOW_AD_HOC_INSTANCES - Static variable in interface org.primordion.xholon.io.xml.IXml2Xholon
An ad-hoc instance is a IXholon that has no officially declared IXholonClass.
AlphabetCE - Static variable in interface org.primordion.memcomp.app.CoopPSys00ex0.CeCoopPSys00ex0
 
AminoAcidCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AminoAcidPaletteCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AminoGroupCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
Amount - Class in org.primordion.xholon.service.mathscieng
This is a very simplistic replacement for the JScience org.jscience.physics.amount.Amount class.
Amount() - Constructor for class org.primordion.xholon.service.mathscieng.Amount
 
AmpaKainateReceptorCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AmpCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AMPCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
AMPCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
AnalysisCat - Class in org.primordion.xholon.mech.petrinet.cat
Analysis and Reporting for Mathematical Categories.
AnalysisCat() - Constructor for class org.primordion.xholon.mech.petrinet.cat.AnalysisCat
 
AnalysisCRN - Class in org.primordion.xholon.mech.petrinet.crn
Analysis and Reporting for Chemical Reaction Networks (CRN).
AnalysisCRN() - Constructor for class org.primordion.xholon.mech.petrinet.crn.AnalysisCRN
 
AnalysisCRNCE - Static variable in interface org.primordion.xholon.common.mechanism.CePetriNetEntity
 
AnalysisMemComp - Class in org.primordion.xholon.mech.petrinet.memcomp
Analysis and Reporting for Membrane Computing.
AnalysisMemComp() - Constructor for class org.primordion.xholon.mech.petrinet.memcomp.AnalysisMemComp
 
AnalysisPetriNet - Class in org.primordion.xholon.mech.petrinet
Analysis and Reporting for Petri nets.
AnalysisPetriNet() - Constructor for class org.primordion.xholon.mech.petrinet.AnalysisPetriNet
 
AnalysisPetriNetCE - Static variable in interface org.primordion.xholon.common.mechanism.CePetriNetEntity
 
AnalysisPNCE - Static variable in interface org.primordion.xholon.common.mechanism.CePetriNetEntity
 
AnchorProteinCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
andCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
AndrogenCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AnElevatorSystemCE - Static variable in interface org.primordion.user.xmiapps.Elevator.CeElevator
 
angle - Variable in class org.primordion.xholon.io.vrml.SFRotation
 
AnimalCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
anInteger - Variable in class org.primordion.user.xmiapps.TestFsm.XhTestFsm
 
Annotation - Class in org.primordion.xholon.base
Any Xholon node can be given a textual annotation.
Annotation() - Constructor for class org.primordion.xholon.base.Annotation
default constructor
Annotation(String) - Constructor for class org.primordion.xholon.base.Annotation
constructor
Annotation - Class in org.primordion.xholon.mech.mathml.content
MathML 2.0 - annotation
Annotation() - Constructor for class org.primordion.xholon.mech.mathml.content.Annotation
 
ANNOTATION_MAX_DISPLAY_LEN - Static variable in interface org.primordion.xholon.base.IAnnotation
An annotation string could be any length.
AnnotationCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAnnotation
 
annotationCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
Annotationxml - Class in org.primordion.xholon.mech.mathml.content
MathML 2.0 - annotation-xml
Annotationxml() - Constructor for class org.primordion.xholon.mech.mathml.content.Annotationxml
 
annotationxmlCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
AnotherPartOfTheSystemCE - Static variable in interface org.primordion.user.app.Red.CeRed
 
AnotherPartOfTheSystemCE - Static variable in interface org.primordion.user.xmiapps.__XholonTemplate__.Ce__XholonTemplate__
 
AntCE - Static variable in interface org.primordion.ealontro.app.AntForaging.CeAntForaging
 
AntCE - Static variable in interface org.primordion.ealontro.app.EcjAntTrail.CeAntTrail
 
ANTCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
AntForagingGPCE - Static variable in interface org.primordion.ealontro.app.AntForaging.CeAntForaging
 
AntForagingSystemCE - Static variable in interface org.primordion.ealontro.app.AntForaging.CeAntForaging
 
AOT_BILAYER - Static variable in interface org.primordion.cellontro.base.IBioXholonClass
 
AOT_ENZYME - Static variable in interface org.primordion.cellontro.base.IBioXholonClass
 
AOT_NULL - Static variable in interface org.primordion.cellontro.base.IBioXholonClass
 
AOT_TRANSPORTER - Static variable in interface org.primordion.cellontro.base.IBioXholonClass
 
APartOfTheSystemCE - Static variable in interface org.primordion.user.app.Red.CeRed
 
APartOfTheSystemCE - Static variable in interface org.primordion.user.xmiapps.__XholonTemplate__.Ce__XholonTemplate__
 
APCE - Static variable in interface org.primordion.xholon.common.mechanism.CeXBar
 
App09SpatialGames - Class in org.primordion.user.app.SpatialGames
This is the detailed behavior of a sample Xholon application.
App09SpatialGames() - Constructor for class org.primordion.user.app.SpatialGames.App09SpatialGames
Constructor.
App1dSimple - Class in org.primordion.user.app.Simple1d
1D Cellular Automaton.
App1dSimple() - Constructor for class org.primordion.user.app.Simple1d.App1dSimple
Constructor.
App__XholonTemplate__ - Class in org.primordion.user.xmiapps.__XholonTemplate__
__XholonTemplate__ application - Xholon Java
App__XholonTemplate__() - Constructor for class org.primordion.user.xmiapps.__XholonTemplate__.App__XholonTemplate__
 
AppAdapSysLab - Class in org.primordion.ctrnn.AdapSysLab
Continuous-Time Recurrent Neural Network (CTRNN).
AppAdapSysLab() - Constructor for class org.primordion.ctrnn.AdapSysLab.AppAdapSysLab
 
AppAntForaging - Class in org.primordion.ealontro.app.AntForaging
Ant System with Genetic Programming.
AppAntForaging() - Constructor for class org.primordion.ealontro.app.AntForaging.AppAntForaging
 
AppAntTrail - Class in org.primordion.ealontro.app.EcjAntTrail
Ant Trail.
AppAntTrail() - Constructor for class org.primordion.ealontro.app.EcjAntTrail.AppAntTrail
 
AppBeard2005_UML_Xholon_Step4_v1 - Class in org.primordion.user.xmiapps.beard41
Beard2005_UML_Xholon_Step4_v1 application - Xholon Java
AppBeard2005_UML_Xholon_Step4_v1() - Constructor for class org.primordion.user.xmiapps.beard41.AppBeard2005_UML_Xholon_Step4_v1
 
AppBestiary - Class in org.primordion.user.app.Bestiary
Bestiary application - Xholon Java
AppBestiary() - Constructor for class org.primordion.user.app.Bestiary.AppBestiary
 
AppBraneCalc - Class in org.primordion.memcomp.app
Brane Calculus.
AppBraneCalc() - Constructor for class org.primordion.memcomp.app.AppBraneCalc
Constructor.
AppBraneCalc1 - Class in org.primordion.memcomp.app.BraneCalc1
Brane Calculus.
AppBraneCalc1() - Constructor for class org.primordion.memcomp.app.BraneCalc1.AppBraneCalc1
 
Appcarboncycle03 - Class in org.primordion.user.app.climatechange.carboncycle03
carboncycle03 application - Xholon Java
Appcarboncycle03() - Constructor for class org.primordion.user.app.climatechange.carboncycle03.Appcarboncycle03
 
AppCartCentering - Class in org.primordion.ealontro.app.CartCentering
Cart Centering System with Genetic Programming.
AppCartCentering() - Constructor for class org.primordion.ealontro.app.CartCentering.AppCartCentering
Constructor.
AppCell - Class in org.primordion.cellontro.app
Cell Model.
AppCell() - Constructor for class org.primordion.cellontro.app.AppCell
Constructor.
AppCellAutop - Class in org.primordion.cellontro.app
Cell Model with Autopoiesis.
AppCellAutop() - Constructor for class org.primordion.cellontro.app.AppCellAutop
Constructor.
AppChameleon - Class in org.primordion.xholon.app.Chameleon
Chameleon application - Xholon Java
AppChameleon() - Constructor for class org.primordion.xholon.app.Chameleon.AppChameleon
 
AppClientBusinessDelegateCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAppClient
 
AppClientBusinessDelegateCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBusApp
 
AppClientCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAppClient
 
AppClientControllerCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAppClient
 
AppClientControllerCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBusApp
 
AppClientModelCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAppClient
 
AppClientModelCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBusApp
 
AppClientMVCCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAppClient
 
AppClientMVCCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBusApp
 
AppClientViewCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAppClient
 
AppClientViewCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBusApp
 
AppClientWorkerCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAppClient
 
AppClientWorkerCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBusApp
 
AppCollisions - Class in org.primordion.user.app.Collisions
Collisions.
AppCollisions() - Constructor for class org.primordion.user.app.Collisions.AppCollisions
Constructor.
AppCoopPSys00ex0 - Class in org.primordion.memcomp.app.CoopPSys00ex0
Membrane Computing.
AppCoopPSys00ex0() - Constructor for class org.primordion.memcomp.app.CoopPSys00ex0.AppCoopPSys00ex0
 
AppCoopSys02ex32_1 - Class in org.primordion.memcomp.app.CoopSys02ex32_1
Membrane Computing.
AppCoopSys02ex32_1() - Constructor for class org.primordion.memcomp.app.CoopSys02ex32_1.AppCoopSys02ex32_1
 
AppCoopSys02ex343_1 - Class in org.primordion.memcomp.app.CoopSys02ex343_1
Membrane Computing.
AppCoopSys02ex343_1() - Constructor for class org.primordion.memcomp.app.CoopSys02ex343_1.AppCoopSys02ex343_1
 
AppCoopSys02ex343_2 - Class in org.primordion.memcomp.app.CoopSys02ex343_2
Membrane Computing.
AppCoopSys02ex343_2() - Constructor for class org.primordion.memcomp.app.CoopSys02ex343_2.AppCoopSys02ex343_2
 
AppCtrnn - Class in org.primordion.ctrnn.AdapSysLab
Continuous-Time Recurrent Neural Network (CTRNN).
AppCtrnn() - Constructor for class org.primordion.ctrnn.AdapSysLab.AppCtrnn
Constructor.
AppElevator - Class in org.primordion.user.xmiapps.Elevator
Elevator application - Xholon Java
AppElevator() - Constructor for class org.primordion.user.xmiapps.Elevator.AppElevator
 
AppElevator_ShowStates - Class in org.primordion.user.xmiapps.Elevator
Elevator application - Xholon Java
AppElevator_ShowStates() - Constructor for class org.primordion.user.xmiapps.Elevator.AppElevator_ShowStates
 
appendChild(Element, String) - Static method in class org.client.HtmlElementCache
Append an HTML subtree as the last child of an existing HTML element.
appendChild(IXholon) - Method in interface org.primordion.xholon.base.IXholon
Append this node as the last child of its new parent node.
appendChild(String, String) - Method in interface org.primordion.xholon.base.IXholon
Create a new child, and append it as the last child of this node.
appendChild(String, String, String) - Method in interface org.primordion.xholon.base.IXholon
Create a new child, and append it as the last child of this node.
appendChild(IXholon) - Method in class org.primordion.xholon.base.Xholon
 
appendChild(String, String) - Method in class org.primordion.xholon.base.Xholon
 
appendChild(String, String, String) - Method in class org.primordion.xholon.base.Xholon
 
appendChild(String, String) - Method in class org.primordion.xholon.base.XholonMap
 
appendChild(String, String, String) - Method in class org.primordion.xholon.base.XholonMap
 
appendChild(XholonTreeNode) - Method in class org.primordion.xholon.util.XholonTreeNode
 
appendsOwnChildren() - Method in interface org.primordion.xholon.base.IXholon
Are instances of this class responsible for appending their own children? This is useful for container classes that need to control the type of nodes that they contain.
appendsOwnChildren() - Method in class org.primordion.xholon.base.Xholon
 
AppEnglish2French - Class in org.primordion.user.app.English2French
English2French application - Xholon Java
AppEnglish2French() - Constructor for class org.primordion.user.app.English2French.AppEnglish2French
 
Appfeinberg1 - Class in org.primordion.user.app.petrinet.feinberg1
petrinet feinberg1 - Xholon Java
Appfeinberg1() - Constructor for class org.primordion.user.app.petrinet.feinberg1.Appfeinberg1
 
AppFibonacci - Class in org.primordion.dynsys.app
Dynamical Systems - Fibonacci.
AppFibonacci() - Constructor for class org.primordion.dynsys.app.AppFibonacci
Constructor.
AppFsm06ex1 - Class in org.primordion.memcomp.app.Fsm06ex1
Membrane Computing.
AppFsm06ex1() - Constructor for class org.primordion.memcomp.app.Fsm06ex1.AppFsm06ex1
 
AppFsm06ex1_Fsm - Class in org.primordion.memcomp.app.Fsm06ex1_Fsm
Membrane Computing.
AppFsm06ex1_Fsm() - Constructor for class org.primordion.memcomp.app.Fsm06ex1_Fsm.AppFsm06ex1_Fsm
Constructor.
AppFsm06ex1_FsmXmi - Class in org.primordion.user.xmiapps.Fsm06ex1_Fsm
Fsm06ex1_Fsm application - Xholon Java
AppFsm06ex1_FsmXmi() - Constructor for class org.primordion.user.xmiapps.Fsm06ex1_Fsm.AppFsm06ex1_FsmXmi
 
AppFurcifer - Class in org.primordion.xholon.app.Furcifer
Furcifer application - Xholon Java
AppFurcifer() - Constructor for class org.primordion.xholon.app.Furcifer.AppFurcifer
 
AppGameOfLife - Class in org.primordion.user.app.GameOfLife
Conway's classic Game of Life.
AppGameOfLife() - Constructor for class org.primordion.user.app.GameOfLife.AppGameOfLife
Constructor.
AppGenerator - Class in org.server
Generate a new IApplication subclass with app-specific methods.
AppGenerator() - Constructor for class org.server.AppGenerator
 
AppGeneric - Class in org.primordion.user.app.Generic
A generic Xholon application, used for test purposes.
AppGeneric() - Constructor for class org.primordion.user.app.Generic.AppGeneric
Constructor.
AppGravity1 - Class in org.primordion.dynsys.app
Dynamical Systems - Gravity1.
AppGravity1() - Constructor for class org.primordion.dynsys.app.AppGravity1
Constructor.
AppHelloWorld - Class in org.primordion.user.app.helloworldjnlp
Hello World.
AppHelloWorld() - Constructor for class org.primordion.user.app.helloworldjnlp.AppHelloWorld
Constructor.
AppHelloWorld_TestTime - Class in org.primordion.user.app.HelloWorld_TestTime
Test XholonTime using Hello World.
AppHelloWorld_TestTime() - Constructor for class org.primordion.user.app.HelloWorld_TestTime.AppHelloWorld_TestTime
Constructor.
AppHelloWorldTutorial - Class in org.primordion.user.xmiapps.HelloWorldTutorial
HelloWorldTutorial application - Xholon Java
AppHelloWorldTutorial() - Constructor for class org.primordion.user.xmiapps.HelloWorldTutorial.AppHelloWorldTutorial
 
AppHelloWorldTutorial_multiWorld - Class in org.primordion.user.xmiapps.HelloWorldTutorial_multiWorld
HelloWorldTutorial_multiWorld application - Xholon Java
AppHelloWorldTutorial_multiWorld() - Constructor for class org.primordion.user.xmiapps.HelloWorldTutorial_multiWorld.AppHelloWorldTutorial_multiWorld
 
AppHelloWorldTutorial_plus - Class in org.primordion.user.xmiapps.HelloWorldTutorial_plus
HelloWorldTutorial_plus application - Xholon Java
AppHelloWorldTutorial_plus() - Constructor for class org.primordion.user.xmiapps.HelloWorldTutorial_plus.AppHelloWorldTutorial_plus
 
AppHelloWorldTutorial_universe - Class in org.primordion.user.xmiapps.HelloWorldTutorial_universe
HelloWorldTutorial_universe application - Xholon Java
AppHelloWorldTutorial_universe() - Constructor for class org.primordion.user.xmiapps.HelloWorldTutorial_universe.AppHelloWorldTutorial_universe
 
AppHelloWorldTutorialArgoUML - Class in org.primordion.user.xmiappsArgoUML
HelloWorldTutorial application - Inheritance Hierarchy
AppHelloWorldTutorialArgoUML() - Constructor for class org.primordion.user.xmiappsArgoUML.AppHelloWorldTutorialArgoUML
 
AppHelloWorldTutorialSysML - Class in org.primordion.user.xmiappsTcSysML
HelloWorldTutorialSysML application - Xholon Java
AppHelloWorldTutorialSysML() - Constructor for class org.primordion.user.xmiappsTcSysML.AppHelloWorldTutorialSysML
 
AppHelloWorldTutorialTc - Class in org.primordion.user.xmiappsTc.HelloWorldTutorial
HelloWorldTutorial application - Xholon Java
AppHelloWorldTutorialTc() - Constructor for class org.primordion.user.xmiappsTc.HelloWorldTutorial.AppHelloWorldTutorialTc
 
AppHex - Class in org.primordion.user.app.Hex
Hexagonal Grid.
AppHex() - Constructor for class org.primordion.user.app.Hex.AppHex
Constructor.
Appigm - Class in org.primordion.user.app.climatechange.igm
igm application - Xholon Java
Appigm() - Constructor for class org.primordion.user.app.climatechange.igm.Appigm
 
AppInterest - Class in org.primordion.dynsys.app
Dynamical Systems - Interest.
AppInterest() - Constructor for class org.primordion.dynsys.app.AppInterest
Constructor.
Appleakybucket - Class in org.primordion.dynsys.app.leakybucket
Leaky Bucket model.
Appleakybucket() - Constructor for class org.primordion.dynsys.app.leakybucket.Appleakybucket
 
AppletCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
Application - Class in org.primordion.xholon.app
This is an abstract class from which all Xholon applications should subclass.
Application() - Constructor for class org.primordion.xholon.app.Application
Constructor.
ApplicationCE - Static variable in interface org.primordion.xholon.common.mechanism.CeControl
 
ApplicationNull - Class in org.primordion.xholon.app
This is the simplest possible concrete extension of Application.
ApplicationNull() - Constructor for class org.primordion.xholon.app.ApplicationNull
 
AppLife - Class in org.primordion.cellontro.app
Life.
AppLife() - Constructor for class org.primordion.cellontro.app.AppLife
Constructor.
Apply - Class in org.primordion.xholon.mech.mathml.content
MathML 2.0 - apply
Apply() - Constructor for class org.primordion.xholon.mech.mathml.content.Apply
 
applyCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
appM - Static variable in class org.primordion.xholon.base.Msg
 
appMain(String[], String, String) - Static method in class org.primordion.xholon.app.Application
Perform most or all of the work required of main() in an Application subclass.
AppMathmlTest1 - Class in org.primordion.user.app.mathmltest1
MathML example.
AppMathmlTest1() - Constructor for class org.primordion.user.app.mathmltest1.AppMathmlTest1
 
Appmdcs - Class in org.primordion.user.app.climatechange.mdcs.m2_1mp
MDCS m2_1 model, with message passing.
Appmdcs() - Constructor for class org.primordion.user.app.climatechange.mdcs.m2_1mp.Appmdcs
 
Appmdcs - Class in org.primordion.user.app.climatechange.mdcs.m2_2mp
MDCS m2_1 model, with message passing.
Appmdcs() - Constructor for class org.primordion.user.app.climatechange.mdcs.m2_2mp.Appmdcs
 
AppMemComp - Class in org.primordion.memcomp.app
Membrane Computing.
AppMemComp() - Constructor for class org.primordion.memcomp.app.AppMemComp
Constructor.
AppMeTTTa - Class in org.primordion.user.app.MeTTTa
Xholon MeTTTa
AppMeTTTa() - Constructor for class org.primordion.user.app.MeTTTa.AppMeTTTa
 
Appmodel04 - Class in org.primordion.user.app.climatechange.model04
model04 application - Xholon Java
Appmodel04() - Constructor for class org.primordion.user.app.climatechange.model04.Appmodel04
 
AppOrNodeSample - Class in org.primordion.user.app.OrNode
OrNode Sample.
AppOrNodeSample() - Constructor for class org.primordion.user.app.OrNode.AppOrNodeSample
Constructor.
AppPingPong - Class in org.primordion.user.app.PingPong
Ping Pong.
AppPingPong() - Constructor for class org.primordion.user.app.PingPong.AppPingPong
Constructor.
Apppn - Class in org.primordion.user.app.azimuth.pn01
Azimuth Petri Net app.
Apppn() - Constructor for class org.primordion.user.app.azimuth.pn01.Apppn
 
AppProvidedRequiredTest - Class in org.primordion.user.xmiapps.ProvidedRequiredTest
ProvidedRequiredTest application - Xholon Java
AppProvidedRequiredTest() - Constructor for class org.primordion.user.xmiapps.ProvidedRequiredTest.AppProvidedRequiredTest
 
AppRavaszHnm - Class in org.primordion.user.app.RavaszHnm
RavaszHnm application - Xholon Java
AppRavaszHnm() - Constructor for class org.primordion.user.app.RavaszHnm.AppRavaszHnm
 
AppRcs1 - Class in org.primordion.user.app.rcs.Rcs1
Regulated Catalyzing System - Glycogen Phosphorylase (GP) - Symbolic.
AppRcs1() - Constructor for class org.primordion.user.app.rcs.Rcs1.AppRcs1
 
AppRcs2 - Class in org.primordion.user.app.rcs.Rcs2
Regulated Catalyzing System, version 2.
AppRcs2() - Constructor for class org.primordion.user.app.rcs.Rcs2.AppRcs2
 
AppRcs_GP_FSM - Class in org.primordion.user.xmiapps.Rcs_GP_FSM
Rcs_GP_FSM application - Xholon Java
AppRcs_GP_FSM() - Constructor for class org.primordion.user.xmiapps.Rcs_GP_FSM.AppRcs_GP_FSM
 
AppRcs_GP_FSM_Grid - Class in org.primordion.user.xmiapps.Rcs_GP_FSM_Grid
Rcs_GP_FSM_Grid application - Xholon Java
AppRcs_GP_FSM_Grid() - Constructor for class org.primordion.user.xmiapps.Rcs_GP_FSM_Grid.AppRcs_GP_FSM_Grid
 
AppRcs_GP_MM - Class in org.primordion.user.xmiapps.Rcs_GP_MM
Rcs_GP_MM application - Xholon Java
AppRcs_GP_MM() - Constructor for class org.primordion.user.xmiapps.Rcs_GP_MM.AppRcs_GP_MM
 
AppRcs_GP_MM_NoSymbols - Class in org.primordion.user.xmiapps.Rcs_GP_MM_NoSymbols
Rcs_GP_MM_NoSymbols application - Xholon Java
AppRcs_GP_MM_NoSymbols() - Constructor for class org.primordion.user.xmiapps.Rcs_GP_MM_NoSymbols.AppRcs_GP_MM_NoSymbols
 
AppRed - Class in org.primordion.user.app.Red
Red application - Xholon Java
AppRed() - Constructor for class org.primordion.user.app.Red.AppRed
 
AppRisk - Class in org.primordion.user.app.Risk
Risk application - Xholon Java
AppRisk() - Constructor for class org.primordion.user.app.Risk.AppRisk
 
Approomsghosts - Class in org.primordion.user.app.bigraph.roomsghosts
bigraph roomsghosts - Xholon Java
Approomsghosts() - Constructor for class org.primordion.user.app.bigraph.roomsghosts.Approomsghosts
 
approxCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
AppSbml - Class in org.primordion.cellontro.app.sbml
SBML Application.
AppSbml() - Constructor for class org.primordion.cellontro.app.sbml.AppSbml
Constructor.
AppScheffranNActor - Class in org.primordion.dynsys.app
Dynamical Systems - ScheffranNActor.
AppScheffranNActor() - Constructor for class org.primordion.dynsys.app.AppScheffranNActor
Constructor.
AppScheffranTwoActor - Class in org.primordion.dynsys.app
Dynamical Systems - ScheffranTwoActor.
AppScheffranTwoActor() - Constructor for class org.primordion.dynsys.app.AppScheffranTwoActor
Constructor.
Appsolarsystemtest - Class in org.primordion.user.app.climatechange.solarsystemtest
solarsystemtest application - Xholon Java
Appsolarsystemtest() - Constructor for class org.primordion.user.app.climatechange.solarsystemtest.Appsolarsystemtest
 
AppSpringIdol - Class in org.primordion.user.app.SpringIdol
This Xholon application is a reimplementation of the "Spring Idol" contest as described and implemented in the book: Walls, Craig.
AppSpringIdol() - Constructor for class org.primordion.user.app.SpringIdol.AppSpringIdol
Constructor.
Appstability - Class in org.primordion.dynsys.app.stability
Stability model.
Appstability() - Constructor for class org.primordion.dynsys.app.stability.Appstability
 
AppStateMachineOnly - Class in org.primordion.user.xmiappsTc.StateMachineOnly
StateMachineOnly application - Xholon Java
AppStateMachineOnly() - Constructor for class org.primordion.user.xmiappsTc.StateMachineOnly.AppStateMachineOnly
 
AppStopWatch - Class in org.primordion.user.xmiapps.StopWatch
StopWatch application - Xholon Java
AppStopWatch() - Constructor for class org.primordion.user.xmiapps.StopWatch.AppStopWatch
 
AppStopWatch_Xhym - Class in org.primordion.user.xmiapps.StopWatch_Xhym
StopWatch application - Xholon Java
AppStopWatch_Xhym() - Constructor for class org.primordion.user.xmiapps.StopWatch_Xhym.AppStopWatch_Xhym
 
AppStupidModel1 - Class in org.primordion.user.app.StupidModel.sm1
StupidModel1 application - Xholon Java
AppStupidModel1() - Constructor for class org.primordion.user.app.StupidModel.sm1.AppStupidModel1
 
AppStupidModel10 - Class in org.primordion.user.app.StupidModel.sm10
StupidModel10 application - Xholon Java
AppStupidModel10() - Constructor for class org.primordion.user.app.StupidModel.sm10.AppStupidModel10
 
AppStupidModel11 - Class in org.primordion.user.app.StupidModel.sm11
StupidModel11 application - Xholon Java
AppStupidModel11() - Constructor for class org.primordion.user.app.StupidModel.sm11.AppStupidModel11
 
AppStupidModel12 - Class in org.primordion.user.app.StupidModel.sm12
StupidModel12 application - Xholon Java
AppStupidModel12() - Constructor for class org.primordion.user.app.StupidModel.sm12.AppStupidModel12
 
AppStupidModel13 - Class in org.primordion.user.app.StupidModel.sm13
StupidModel13 application - Xholon Java
AppStupidModel13() - Constructor for class org.primordion.user.app.StupidModel.sm13.AppStupidModel13
 
AppStupidModel14 - Class in org.primordion.user.app.StupidModel.sm14
StupidModel14 application - Xholon Java
AppStupidModel14() - Constructor for class org.primordion.user.app.StupidModel.sm14.AppStupidModel14
 
AppStupidModel15 - Class in org.primordion.user.app.StupidModel.sm15
StupidModel15 application - Xholon Java
AppStupidModel15() - Constructor for class org.primordion.user.app.StupidModel.sm15.AppStupidModel15
 
AppStupidModel16 - Class in org.primordion.user.app.StupidModel.sm16
StupidModel16 application - Xholon Java
AppStupidModel16() - Constructor for class org.primordion.user.app.StupidModel.sm16.AppStupidModel16
 
AppStupidModel16nl - Class in org.primordion.user.app.StupidModel.sm16nl
StupidModel16nl application - Xholon Java
AppStupidModel16nl() - Constructor for class org.primordion.user.app.StupidModel.sm16nl.AppStupidModel16nl
 
AppStupidModel2 - Class in org.primordion.user.app.StupidModel.sm2
StupidModel2 application - Xholon Java
AppStupidModel2() - Constructor for class org.primordion.user.app.StupidModel.sm2.AppStupidModel2
 
AppStupidModel3 - Class in org.primordion.user.app.StupidModel.sm3
StupidModel3 application - Xholon Java
AppStupidModel3() - Constructor for class org.primordion.user.app.StupidModel.sm3.AppStupidModel3
 
AppStupidModel4 - Class in org.primordion.user.app.StupidModel.sm4
StupidModel4 application - Xholon Java
AppStupidModel4() - Constructor for class org.primordion.user.app.StupidModel.sm4.AppStupidModel4
 
AppStupidModel5 - Class in org.primordion.user.app.StupidModel.sm5
StupidModel5 application - Xholon Java
AppStupidModel5() - Constructor for class org.primordion.user.app.StupidModel.sm5.AppStupidModel5
 
AppStupidModel5tg - Class in org.primordion.user.app.StupidModel.sm5tg
StupidModel5tg application - Xholon Java
AppStupidModel5tg() - Constructor for class org.primordion.user.app.StupidModel.sm5tg.AppStupidModel5tg
 
AppStupidModel6 - Class in org.primordion.user.app.StupidModel.sm6
StupidModel6 application - Xholon Java
AppStupidModel6() - Constructor for class org.primordion.user.app.StupidModel.sm6.AppStupidModel6
 
AppStupidModel7 - Class in org.primordion.user.app.StupidModel.sm7
StupidModel7 application - Xholon Java
AppStupidModel7() - Constructor for class org.primordion.user.app.StupidModel.sm7.AppStupidModel7
 
AppStupidModel8 - Class in org.primordion.user.app.StupidModel.sm8
StupidModel8 application - Xholon Java
AppStupidModel8() - Constructor for class org.primordion.user.app.StupidModel.sm8.AppStupidModel8
 
AppStupidModel9 - Class in org.primordion.user.app.StupidModel.sm9
StupidModel9 application - Xholon Java
AppStupidModel9() - Constructor for class org.primordion.user.app.StupidModel.sm9.AppStupidModel9
 
AppSymAnti02ex41 - Class in org.primordion.memcomp.app.SymAnti02ex41
Membrane Computing.
AppSymAnti02ex41() - Constructor for class org.primordion.memcomp.app.SymAnti02ex41.AppSymAnti02ex41
 
AppTestFsm - Class in org.primordion.user.xmiapps.TestFsm
TestFsm application - Xholon Java
AppTestFsm() - Constructor for class org.primordion.user.xmiapps.TestFsm.AppTestFsm
 
AppTestFsmForkJoin - Class in org.primordion.user.xmiapps.TestFsmForkJoin
TestFsmForkJoin application - Xholon Java
AppTestFsmForkJoin() - Constructor for class org.primordion.user.xmiapps.TestFsmForkJoin.AppTestFsmForkJoin
 
AppTestFsmHistory - Class in org.primordion.user.xmiapps.TestFsmHistory
TestFsmHistory application - Xholon Java
AppTestFsmHistory() - Constructor for class org.primordion.user.xmiapps.TestFsmHistory.AppTestFsmHistory
 
AppTestFsmJunction - Class in org.primordion.user.xmiapps.TestFsmJunction
TestFsmJunction application - Xholon Java
AppTestFsmJunction() - Constructor for class org.primordion.user.xmiapps.TestFsmJunction.AppTestFsmJunction
 
AppTestFsmKW - Class in org.primordion.user.app.TestFsm
Test FSM.
AppTestFsmKW() - Constructor for class org.primordion.user.app.TestFsm.AppTestFsmKW
Constructor.
AppTestFsmOrthogonal - Class in org.primordion.user.xmiapps.TestFsmOrthogonal
TestFsmOrthogonal application - Xholon Java
AppTestFsmOrthogonal() - Constructor for class org.primordion.user.xmiapps.TestFsmOrthogonal.AppTestFsmOrthogonal
 
ApptestNodePorts - Class in org.primordion.user.app.testNodePorts
testNodePorts - Xholon Java
ApptestNodePorts() - Constructor for class org.primordion.user.app.testNodePorts.ApptestNodePorts
 
AppTrain - Class in org.primordion.dynsys.app
Dynamical Systems - Train.
AppTrain() - Constructor for class org.primordion.dynsys.app.AppTrain
Constructor.
AppTurnstile - Class in org.primordion.user.app.Turnstile
Turnstile FSM.
AppTurnstile() - Constructor for class org.primordion.user.app.Turnstile.AppTurnstile
Constructor.
AppTurtleExample1 - Class in org.primordion.user.app.TurtleExample1
TurtleExample1 application - Xholon Java
AppTurtleExample1() - Constructor for class org.primordion.user.app.TurtleExample1.AppTurtleExample1
 
AppTutorial4 - Class in org.primordion.ealontro.app.EcjTutorial4
ECJ Tutorial 4.
AppTutorial4() - Constructor for class org.primordion.ealontro.app.EcjTutorial4.AppTutorial4
 
AppTweenTrees - Class in org.primordion.user.app.TweenTrees
TweenTrees application - Xholon Java
AppTweenTrees() - Constructor for class org.primordion.user.app.TweenTrees.AppTweenTrees
 
AppWatch - Class in org.primordion.user.xmiapps.Watch
Watch application - Inheritance Hierarchy
AppWatch() - Constructor for class org.primordion.user.xmiapps.Watch.AppWatch
 
AppWaterLogic - Class in org.primordion.user.app.WaterLogic
WaterLogic application - Xholon Java
AppWaterLogic() - Constructor for class org.primordion.user.app.WaterLogic.AppWaterLogic
 
AppWolfSheepGrass - Class in org.primordion.user.app.WolfSheepGrass
Wolf Sheep Grass.
AppWolfSheepGrass() - Constructor for class org.primordion.user.app.WolfSheepGrass.AppWolfSheepGrass
 
AppXBar_ex1 - Class in org.primordion.user.app.XBar
XBar application - Xholon Java
AppXBar_ex1() - Constructor for class org.primordion.user.app.XBar.AppXBar_ex1
 
Arc - Class in org.primordion.xholon.mech.petrinet
Petri net Arc.
Arc() - Constructor for class org.primordion.xholon.mech.petrinet.Arc
 
arccosCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
arccoshCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
arccotCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
arccothCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
arccscCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
arccschCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
ArchebacteriaCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
ArcPNCE - Static variable in interface org.primordion.xholon.common.mechanism.CePetriNetEntity
 
arcsecCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
arcsechCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
arcsinCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
arcsinhCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
arctanCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
arctanhCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
ArgCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
argCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
arithCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
ARROW_OF_TIME_FREQ - Static variable in class org.primordion.cellontro.app.XhLife
 
ArtCE - Static variable in interface org.primordion.xholon.common.mechanism.CeXBar
 
ArteryCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AsnCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AspCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
assignCE - Static variable in interface org.primordion.xholon.common.mechanism.CeScxmlEntity
 
aStaticInt - Static variable in class org.primordion.user.xmiapps.TestFsm.XhTestFsm
 
aString - Variable in class org.primordion.user.xmiapps.TestFsm.XhTestFsm
 
AstrocyteCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AstrocyteCellBodyCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AstrocyteFootCapillaryCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AstrocyteFootCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AstrocyteFootNeuronCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AstrocyteWithInnardsCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AstronomicalObject - Class in org.primordion.user.app.solarsystem
Every astronomical object (Star, Planet, StarSystem, etc.) has some basic properties.
AstronomicalObject() - Constructor for class org.primordion.user.app.solarsystem.AstronomicalObject
 
AT_AUTO - Static variable in class org.primordion.xholon.service.svg.SvgViewBrowser
 
AT_CSS - Static variable in class org.primordion.xholon.service.svg.SvgViewBrowser
 
AT_XML - Static variable in class org.primordion.xholon.service.svg.SvgViewBrowser
 
Atmosphere - Class in org.primordion.user.app.climatechange.mdcs.m2_2mp
Atmosphere
Atmosphere() - Constructor for class org.primordion.user.app.climatechange.mdcs.m2_2mp.Atmosphere
 
Atmosphere - Class in org.primordion.user.app.climatechange.model04
Atmosphere.
Atmosphere() - Constructor for class org.primordion.user.app.climatechange.model04.Atmosphere
 
AtmosphereCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AtmosphericAlbedoAO - Class in org.primordion.user.app.climatechange.model04
Calculate a post-albedo value.
AtmosphericAlbedoAO() - Constructor for class org.primordion.user.app.climatechange.model04.AtmosphericAlbedoAO
 
AtmosphericWindowVCE - Static variable in interface org.primordion.user.app.climatechange.model04.Cemodel04
 
atob(String, int) - Static method in class org.primordion.xholon.util.Misc
Convert an ascii string into a boolean.
atod(String, int) - Static method in class org.primordion.xholon.util.Misc
Convert an ascii string into a double.
atof(String, int) - Static method in class org.primordion.xholon.util.Misc
Convert an ascii string into a float.
atoi(String, int) - Static method in class org.primordion.xholon.util.Misc
Convert an ascii string into an int.
atol(String, int) - Static method in class org.primordion.xholon.util.Misc
Convert an ascii string into a long.
ATPaseCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
ATPCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
AtpCE - Static variable in interface org.primordion.user.app.rcs.Rcs2.CeRcs2
 
ATPCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
AtpCE - Static variable in interface org.primordion.user.xmiapps.Rcs_GP_MM.CeRcs_GP_MM
 
ATPfCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
ATPmCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
ATPsynthaseCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
AtriumCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
ATTR_DEFAULT - Static variable in interface org.primordion.xholon.base.IAttribute
Take the default actions.
ATTR_NULL - Static variable in interface org.primordion.xholon.base.IAttribute
Do nothing.
ATTR_REMOVE - Static variable in interface org.primordion.xholon.base.IAttribute
Remove this attribute node from the Xholon tree.
ATTR_SETID - Static variable in interface org.primordion.xholon.base.IAttribute
Set the Xholon ID of this attribute node.
ATTR_SETPARENT - Static variable in interface org.primordion.xholon.base.IAttribute
Set the value of the attribute in the parent node.
ATTR_SETPARENT_REMOVE - Static variable in interface org.primordion.xholon.base.IAttribute
Set the value in the parent, and remove from the Xholon tree.
ATTR_SETPARENT_SETID - Static variable in interface org.primordion.xholon.base.IAttribute
Set the value in the parent, and set the Xholon ID.
Attribute - Class in org.primordion.xholon.base
An Attribute is a passive object.
Attribute() - Constructor for class org.primordion.xholon.base.Attribute
 
Attribute.Attribute_arrayboolean - Class in org.primordion.xholon.base
 
Attribute.Attribute_arrayboolean() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_arrayboolean
 
Attribute.Attribute_arraybyte - Class in org.primordion.xholon.base
 
Attribute.Attribute_arraybyte() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_arraybyte
 
Attribute.Attribute_arraychar - Class in org.primordion.xholon.base
 
Attribute.Attribute_arraychar() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_arraychar
 
Attribute.Attribute_arraydouble - Class in org.primordion.xholon.base
 
Attribute.Attribute_arraydouble() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_arraydouble
 
Attribute.Attribute_arrayfloat - Class in org.primordion.xholon.base
 
Attribute.Attribute_arrayfloat() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_arrayfloat
 
Attribute.Attribute_arrayint - Class in org.primordion.xholon.base
 
Attribute.Attribute_arrayint() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_arrayint
 
Attribute.Attribute_arraylong - Class in org.primordion.xholon.base
 
Attribute.Attribute_arraylong() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_arraylong
 
Attribute.Attribute_arrayObject - Class in org.primordion.xholon.base
 
Attribute.Attribute_arrayObject() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_arrayObject
 
Attribute.Attribute_arrayshort - Class in org.primordion.xholon.base
 
Attribute.Attribute_arrayshort() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_arrayshort
 
Attribute.Attribute_arrayString - Class in org.primordion.xholon.base
 
Attribute.Attribute_arrayString() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_arrayString
 
Attribute.Attribute_attribute - Class in org.primordion.xholon.base
This is a simple attribute node that is only used for configuration.
Attribute.Attribute_attribute() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_attribute
 
Attribute.Attribute_boolean - Class in org.primordion.xholon.base
 
Attribute.Attribute_boolean() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_boolean
 
Attribute.Attribute_byte - Class in org.primordion.xholon.base
 
Attribute.Attribute_byte() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_byte
 
Attribute.Attribute_char - Class in org.primordion.xholon.base
 
Attribute.Attribute_char() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_char
 
Attribute.Attribute_double - Class in org.primordion.xholon.base
 
Attribute.Attribute_double() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_double
 
Attribute.Attribute_float - Class in org.primordion.xholon.base
 
Attribute.Attribute_float() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_float
 
Attribute.Attribute_int - Class in org.primordion.xholon.base
 
Attribute.Attribute_int() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_int
 
Attribute.Attribute_List - Class in org.primordion.xholon.base
 
Attribute.Attribute_List() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_List
 
Attribute.Attribute_long - Class in org.primordion.xholon.base
 
Attribute.Attribute_long() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_long
 
Attribute.Attribute_Map - Class in org.primordion.xholon.base
 
Attribute.Attribute_Map() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_Map
 
Attribute.Attribute_Object - Class in org.primordion.xholon.base
 
Attribute.Attribute_Object() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_Object
 
Attribute.Attribute_Set - Class in org.primordion.xholon.base
 
Attribute.Attribute_Set() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_Set
 
Attribute.Attribute_short - Class in org.primordion.xholon.base
 
Attribute.Attribute_short() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_short
 
Attribute.Attribute_String - Class in org.primordion.xholon.base
 
Attribute.Attribute_String() - Constructor for class org.primordion.xholon.base.Attribute.Attribute_String
 
Attribute_arraybooleanCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_arraybyteCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_arraycharCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_arraydoubleCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_arrayfloatCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_arrayintCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_arraylongCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_arrayObjectCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_arrayshortCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_arrayStringCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_attributeCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_attributeCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingAttribute
 
Attribute_booleanCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_booleanCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingAttribute
 
Attribute_byteCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_byteCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingAttribute
 
Attribute_charCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_charCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingAttribute
 
Attribute_doubleCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_doubleCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingAttribute
 
Attribute_floatCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_floatCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingAttribute
 
Attribute_intCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_intCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingAttribute
 
Attribute_ListCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_longCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_longCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingAttribute
 
Attribute_MapCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_ObjectCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_ObjectCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingAttribute
 
Attribute_SetCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_shortCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_shortCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingAttribute
 
Attribute_StringCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
Attribute_StringCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingAttribute
 
AttributeCE - Static variable in interface org.primordion.xholon.common.mechanism.CeAttribute
 
AttributeMpCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
autowire(IXholon, String) - Method in class org.primordion.xholon.service.WiringService
Autowire an IXholon node to other nodes.
AveragerAO - Class in org.primordion.user.app.climatechange.model04
Average the solar constant over one day, and over all latitudes.
AveragerAO() - Constructor for class org.primordion.user.app.climatechange.model04.AveragerAO
 
avgVehicleKilometers - Variable in class org.primordion.user.app.Collisions.XhCollisions
 
AXIS_ANCESTOR - Static variable in interface org.primordion.xholon.base.IXPath
 
AXIS_ANCESTORORSELF - Static variable in interface org.primordion.xholon.base.IXPath
 
AXIS_ATTRIBUTE - Static variable in interface org.primordion.xholon.base.IXPath
 
AXIS_CHILD - Static variable in interface org.primordion.xholon.base.IXPath
 
AXIS_DEFAULT - Static variable in interface org.primordion.xholon.base.IXPath
 
AXIS_DESCENDANT - Static variable in interface org.primordion.xholon.base.IXPath
 
AXIS_DESCENDANTORSELF - Static variable in interface org.primordion.xholon.base.IXPath
 
AXIS_FOLLOWING - Static variable in interface org.primordion.xholon.base.IXPath
 
AXIS_FOLLOWINGSIBLING - Static variable in interface org.primordion.xholon.base.IXPath
 
AXIS_NAMESPACE - Static variable in interface org.primordion.xholon.base.IXPath
 
AXIS_PARENT - Static variable in interface org.primordion.xholon.base.IXPath
 
AXIS_PRECEDING - Static variable in interface org.primordion.xholon.base.IXPath
 
AXIS_PRECEDINGSIBLING - Static variable in interface org.primordion.xholon.base.IXPath
 
AXIS_SELF - Static variable in interface org.primordion.xholon.base.IXPath
 
AxonBilayerCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AxonCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AxonHillockCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AxonMembraneCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AxonSegmentCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AxonSegmentSplitterCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
AxpCE - Static variable in interface org.primordion.user.app.rcs.Rcs2.CeRcs2
 
AxpCE - Static variable in interface org.primordion.user.xmiapps.Rcs_GP_MM.CeRcs_GP_MM
 
AxpCE - Static variable in interface org.primordion.user.xmiapps.Rcs_GP_MM_NoSymbols.CeRcs_GP_MM_NoSymbols
 
AxpPort - Static variable in class org.primordion.user.app.rcs.Rcs2.XhRcs2
 
AxpPort - Static variable in class org.primordion.user.xmiapps.Rcs_GP_MM.XhRcs_GP_MM
 
AxpPort - Static variable in class org.primordion.user.xmiapps.Rcs_GP_MM_NoSymbols.XhRcs_GP_MM_NoSymbols
 

B

b - Variable in class org.primordion.xholon.io.vrml.RGBTypeDouble
 
b - Variable in class org.primordion.xholon.io.vrml.RGBTypeInt
 
B_CET_ACE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
B_LEL_ACE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
B_POS_ACE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
B_UNE_ACE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
back(double) - Method in interface org.primordion.xholon.base.ITurtle
Move back a given distance.
back(double) - Method in class org.primordion.xholon.base.Turtle
 
BackRadiationVCE - Static variable in interface org.primordion.user.app.climatechange.model04.Cemodel04
 
Ball - Class in org.primordion.dynsys.app.stability
A ball located on a hill or in a valley.
Ball() - Constructor for class org.primordion.dynsys.app.stability.Ball
 
BallView - Class in org.primordion.dynsys.app.stability
Ball View is implemented using SVG, and the SVG Salamander library.
BallView() - Constructor for class org.primordion.dynsys.app.stability.BallView
 
BaseCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
BaseSaxophonistCE - Static variable in interface org.primordion.user.app.SpringIdol.CeSpringIdol
 
BaseSugarCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
BasicDirectoryModelCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
BB_ACE - Static variable in interface org.primordion.user.app.petrinet.feinberg1.Cefeinberg1
 
BbbCE - Static variable in interface org.primordion.user.app.TweenTrees.CeTweenTrees
 
BCE - Static variable in interface org.primordion.cellontro.app.sbml.CeBrusselator
 
bCE - Static variable in interface org.primordion.memcomp.app.CoopPSys00ex0.CeCoopPSys00ex0
 
bCE - Static variable in interface org.primordion.memcomp.app.CoopSys02ex32_1.CeCoopSys02ex32_1
 
bCE - Static variable in interface org.primordion.memcomp.app.CoopSys02ex343_1.CeCoopSys02ex343_1
 
bCE - Static variable in interface org.primordion.memcomp.app.Fsm06ex1.CeFsm06ex1
 
bCE - Static variable in interface org.primordion.memcomp.app.SymAnti02ex41.CeSymAnti02ex41
 
BCE - Static variable in interface org.primordion.user.app.petrinet.feinberg1.Cefeinberg1
 
BE_ACCE - Static variable in interface org.primordion.user.app.petrinet.feinberg1.Cefeinberg1
 
Beast - Class in org.primordion.user.app.Bestiary
Beast
Beast() - Constructor for class org.primordion.user.app.Bestiary.Beast
 
BeastBehavior - Class in org.primordion.user.app.Bestiary
Beast Behavior
BeastBehavior() - Constructor for class org.primordion.user.app.Bestiary.BeastBehavior
 
BeastBehaviorCE - Static variable in interface org.primordion.user.app.Bestiary.CeBestiary
 
BeastCE - Static variable in interface org.primordion.user.app.Bestiary.CeBestiary
 
BeastsCE - Static variable in interface org.primordion.user.app.Bestiary.CeBestiary
 
beep() - Method in interface org.primordion.xholon.base.IPatch
Make a single short beep sound.
beep() - Method in interface org.primordion.xholon.base.ITurtle
Make a single short beep sound.
beep() - Method in class org.primordion.xholon.base.Patch
 
beep() - Method in class org.primordion.xholon.base.Turtle
 
BEEP_CONTINUOUSLY - Static variable in class org.primordion.user.xmiapps.Watch.XhWatch
 
BeeperCE - Static variable in interface org.primordion.user.xmiapps.Watch.CeWatch
 
BeepTestControlCE - Static variable in interface org.primordion.user.xmiapps.Watch.CeWatch
 
Behavior_gwtjs - Class in org.primordion.xholon.base
GWT JavaScript.
Behavior_gwtjs() - Constructor for class org.primordion.xholon.base.Behavior_gwtjs
 
Behavior_gwtjsproto - Class in org.primordion.xholon.base
GWT JavaScript with prototypes.
Behavior_gwtjsproto() - Constructor for class org.primordion.xholon.base.Behavior_gwtjsproto
 
BehaviorCE - Static variable in interface org.primordion.ctrnn.AdapSysLab.CeAdapSysLab
 
BehaviorCE - Static variable in interface org.primordion.ealontro.app.AntForaging.CeAntForaging
 
BehaviorCE - Static variable in interface org.primordion.ealontro.app.CartCentering.CeCartCentering
 
BehaviorCE - Static variable in interface org.primordion.ealontro.app.EcjAntTrail.CeAntTrail
 
BehaviorCE - Static variable in interface org.primordion.ealontro.app.EcjTutorial4.CeTutorial4
 
BehaviorCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBehavior
 
BestiaryCE - Static variable in interface org.primordion.user.app.Bestiary.CeBestiary
 
BestiaryPattern - Class in org.primordion.user.app.Bestiary
Instances of this class can be pasted into a Bestiary simulation at runtime.
BestiaryPattern() - Constructor for class org.primordion.user.app.Bestiary.BestiaryPattern
 
BevelBorderCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
bias - Variable in class org.primordion.ctrnn.AdapSysLab.XhAbstractCtrnn
 
bindPorts() - Method in interface org.primordion.xholon.base.IXholon
 
bindPorts() - Method in class org.primordion.xholon.base.Xholon
Bind port names to referenced nodes.
BioXholonClass - Class in org.primordion.cellontro.base
BioXholonClass is an application specific extension of XholonClass.
BioXholonClass() - Constructor for class org.primordion.cellontro.base.BioXholonClass
Constructor.
BipolarCellCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
bk(double) - Method in interface org.primordion.xholon.base.ITurtle
Move back a given distance.
bk(double) - Method in class org.primordion.xholon.base.Turtle
 
BlackboardService - Class in org.primordion.xholon.service
Blackboard Service.
BlackboardService() - Constructor for class org.primordion.xholon.service.BlackboardService
 
BloodPlasmaCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
BloodVesselCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
BodyOfWaterCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
BoneMarrowCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
BOOLEAN - Static variable in class org.primordion.xholon.base.XPathConstants
The XPath 1.0 boolean data type.
booleanValue(String) - Static method in class org.primordion.xholon.util.Misc
Return the boolean equivalent of a String.
BorderConstraintsCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
BorderLayoutCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
BOUNDARY_GRID - Static variable in interface org.primordion.xholon.base.IGrid
 
BOUNDARY_TORUS - Static variable in interface org.primordion.xholon.base.IGrid
 
BoundedRangeModelCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
BovineRibonucleaseCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
BovineRibonucleaseMoleculeCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
BovineRibonucleasePPCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
BovineRibonucleaseWithAaActorsCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
BoxCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
BoxLayoutCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
BPGCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
Bpmn_ActivityCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_ArtifactCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_AssociationCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_BusinessProcessModelCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_ComplexGatewayCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_ConnectingObjectCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_DataObjectCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_EndEvent_CancelCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_EndEvent_CompensationCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_EndEvent_ErrorCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_EndEvent_MessageCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_EndEvent_MultipleCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_EndEvent_NoneCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_EndEvent_SignalCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_EndEvent_TerminateCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_EndEventCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_EntityCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_EventCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_ExclusiveGateway_DataBasedCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_ExclusiveGateway_EventBasedCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_ExclusiveGatewayCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_FlowObjectCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_GatewayCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_GroupCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_InclusiveGatewayCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_IntermediateEvent_CancelCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_IntermediateEvent_CompensationCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_IntermediateEvent_ConditionalCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_IntermediateEvent_ErrorCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_IntermediateEvent_LinkCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_IntermediateEvent_MessageCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_IntermediateEvent_MultipleCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_IntermediateEvent_NoneCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_IntermediateEvent_SignalCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_IntermediateEvent_TimerCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_IntermediateEventCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_LaneCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_MessageFlowCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_ParallelGatewayCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_PoolCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_ProcessCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_SequenceFlowCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_StartEvent_ConditionalCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_StartEvent_MessageCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_StartEvent_MultipleCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_StartEvent_NoneCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_StartEvent_SignalCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_StartEvent_TimerCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_StartEventCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_SubProcessCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_SwimlaneCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_TaskCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
Bpmn_TextAnnotationCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBpmn_Entity
 
BracketCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
BrainCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
BraneCalcSystemCE - Static variable in interface org.primordion.memcomp.app.BraneCalc1.CeBraneCalc1
 
BraneCalculusEntityCE - Static variable in interface org.primordion.memcomp.app.BraneCalc1.CeBraneCalc1
 
BroadcastSignalActionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
Bucket - Class in org.primordion.dynsys.app.leakybucket
A bucket.
Bucket() - Constructor for class org.primordion.dynsys.app.leakybucket.Bucket
 
bud(IXholon, IXholon, IXholon) - Method in class org.primordion.memcomp.base.XhAbstractBraneCalc
Bud - Split off an inner membrane.
BudCE - Static variable in interface org.primordion.memcomp.app.BraneCalc1.CeBraneCalc1
 
BugCE - Static variable in interface org.primordion.user.app.StupidModel.sm1.CeStupidModel1
 
BugCE - Static variable in interface org.primordion.user.app.StupidModel.sm10.CeStupidModel10
 
BugCE - Static variable in interface org.primordion.user.app.StupidModel.sm11.CeStupidModel11
 
BugCE - Static variable in interface org.primordion.user.app.StupidModel.sm12.CeStupidModel12
 
BugCE - Static variable in interface org.primordion.user.app.StupidModel.sm13.CeStupidModel13
 
BugCE - Static variable in interface org.primordion.user.app.StupidModel.sm14.CeStupidModel14
 
BugCE - Static variable in interface org.primordion.user.app.StupidModel.sm15.CeStupidModel15
 
BugCE - Static variable in interface org.primordion.user.app.StupidModel.sm16.CeStupidModel16
 
BugCE - Static variable in interface org.primordion.user.app.StupidModel.sm16nl.CeStupidModel16nl
 
BugCE - Static variable in interface org.primordion.user.app.StupidModel.sm2.CeStupidModel2
 
BugCE - Static variable in interface org.primordion.user.app.StupidModel.sm3.CeStupidModel3
 
BugCE - Static variable in interface org.primordion.user.app.StupidModel.sm4.CeStupidModel4
 
BugCE - Static variable in interface org.primordion.user.app.StupidModel.sm5.CeStupidModel5
 
BugCE - Static variable in interface org.primordion.user.app.StupidModel.sm5tg.CeStupidModel5tg
 
BugCE - Static variable in interface org.primordion.user.app.StupidModel.sm6.CeStupidModel6
 
BugCE - Static variable in interface org.primordion.user.app.StupidModel.sm7.CeStupidModel7
 
BugCE - Static variable in interface org.primordion.user.app.StupidModel.sm8.CeStupidModel8
 
BugCE - Static variable in interface org.primordion.user.app.StupidModel.sm9.CeStupidModel9
 
BugsCE - Static variable in interface org.primordion.user.app.StupidModel.sm1.CeStupidModel1
 
BugsCE - Static variable in interface org.primordion.user.app.StupidModel.sm10.CeStupidModel10
 
BugsCE - Static variable in interface org.primordion.user.app.StupidModel.sm11.CeStupidModel11
 
BugsCE - Static variable in interface org.primordion.user.app.StupidModel.sm12.CeStupidModel12
 
BugsCE - Static variable in interface org.primordion.user.app.StupidModel.sm13.CeStupidModel13
 
BugsCE - Static variable in interface org.primordion.user.app.StupidModel.sm14.CeStupidModel14
 
BugsCE - Static variable in interface org.primordion.user.app.StupidModel.sm15.CeStupidModel15
 
BugsCE - Static variable in interface org.primordion.user.app.StupidModel.sm16.CeStupidModel16
 
BugsCE - Static variable in interface org.primordion.user.app.StupidModel.sm16nl.CeStupidModel16nl
 
BugsCE - Static variable in interface org.primordion.user.app.StupidModel.sm2.CeStupidModel2
 
BugsCE - Static variable in interface org.primordion.user.app.StupidModel.sm3.CeStupidModel3
 
BugsCE - Static variable in interface org.primordion.user.app.StupidModel.sm4.CeStupidModel4
 
BugsCE - Static variable in interface org.primordion.user.app.StupidModel.sm5.CeStupidModel5
 
BugsCE - Static variable in interface org.primordion.user.app.StupidModel.sm5tg.CeStupidModel5tg
 
BugsCE - Static variable in interface org.primordion.user.app.StupidModel.sm6.CeStupidModel6
 
BugsCE - Static variable in interface org.primordion.user.app.StupidModel.sm7.CeStupidModel7
 
BugsCE - Static variable in interface org.primordion.user.app.StupidModel.sm8.CeStupidModel8
 
BugsCE - Static variable in interface org.primordion.user.app.StupidModel.sm9.CeStupidModel9
 
BugStupidModel1 - Class in org.primordion.user.app.StupidModel.sm1
StupidModel1 application - Xholon Java
BugStupidModel1() - Constructor for class org.primordion.user.app.StupidModel.sm1.BugStupidModel1
 
BugStupidModel10 - Class in org.primordion.user.app.StupidModel.sm10
StupidModel10 application - Xholon Java
BugStupidModel10() - Constructor for class org.primordion.user.app.StupidModel.sm10.BugStupidModel10
 
BugStupidModel11 - Class in org.primordion.user.app.StupidModel.sm11
StupidModel11 application - Xholon Java
BugStupidModel11() - Constructor for class org.primordion.user.app.StupidModel.sm11.BugStupidModel11
 
BugStupidModel12 - Class in org.primordion.user.app.StupidModel.sm12
StupidModel12 application - Xholon Java
BugStupidModel12() - Constructor for class org.primordion.user.app.StupidModel.sm12.BugStupidModel12
 
BugStupidModel13 - Class in org.primordion.user.app.StupidModel.sm13
StupidModel13 application - Xholon Java
BugStupidModel13() - Constructor for class org.primordion.user.app.StupidModel.sm13.BugStupidModel13
 
BugStupidModel14 - Class in org.primordion.user.app.StupidModel.sm14
StupidModel14 application - Xholon Java
BugStupidModel14() - Constructor for class org.primordion.user.app.StupidModel.sm14.BugStupidModel14
 
BugStupidModel15 - Class in org.primordion.user.app.StupidModel.sm15
StupidModel15 application - Xholon Java
BugStupidModel15() - Constructor for class org.primordion.user.app.StupidModel.sm15.BugStupidModel15
 
BugStupidModel16 - Class in org.primordion.user.app.StupidModel.sm16
StupidModel16 application - Xholon Java
BugStupidModel16() - Constructor for class org.primordion.user.app.StupidModel.sm16.BugStupidModel16
 
BugStupidModel16nl - Class in org.primordion.user.app.StupidModel.sm16nl
StupidModel16nl application - Xholon Java
BugStupidModel16nl() - Constructor for class org.primordion.user.app.StupidModel.sm16nl.BugStupidModel16nl
 
BugStupidModel2 - Class in org.primordion.user.app.StupidModel.sm2
StupidModel2 application - Xholon Java
BugStupidModel2() - Constructor for class org.primordion.user.app.StupidModel.sm2.BugStupidModel2
 
BugStupidModel3 - Class in org.primordion.user.app.StupidModel.sm3
StupidModel3 application - Xholon Java
BugStupidModel3() - Constructor for class org.primordion.user.app.StupidModel.sm3.BugStupidModel3
 
BugStupidModel4 - Class in org.primordion.user.app.StupidModel.sm4
StupidModel4 application - Xholon Java
BugStupidModel4() - Constructor for class org.primordion.user.app.StupidModel.sm4.BugStupidModel4
 
BugStupidModel5 - Class in org.primordion.user.app.StupidModel.sm5
StupidModel5 application - Xholon Java
BugStupidModel5() - Constructor for class org.primordion.user.app.StupidModel.sm5.BugStupidModel5
 
BugStupidModel5tg - Class in org.primordion.user.app.StupidModel.sm5tg
StupidModel5tg application - Xholon Java
BugStupidModel5tg() - Constructor for class org.primordion.user.app.StupidModel.sm5tg.BugStupidModel5tg
 
BugStupidModel6 - Class in org.primordion.user.app.StupidModel.sm6
StupidModel6 application - Xholon Java
BugStupidModel6() - Constructor for class org.primordion.user.app.StupidModel.sm6.BugStupidModel6
 
BugStupidModel7 - Class in org.primordion.user.app.StupidModel.sm7
StupidModel7 application - Xholon Java
BugStupidModel7() - Constructor for class org.primordion.user.app.StupidModel.sm7.BugStupidModel7
 
BugStupidModel8 - Class in org.primordion.user.app.StupidModel.sm8
StupidModel8 application - Xholon Java
BugStupidModel8() - Constructor for class org.primordion.user.app.StupidModel.sm8.BugStupidModel8
 
BugStupidModel9 - Class in org.primordion.user.app.StupidModel.sm9
StupidModel9 application - Xholon Java
BugStupidModel9() - Constructor for class org.primordion.user.app.StupidModel.sm9.BugStupidModel9
 
BusAppCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBusApp
 
BusAppDaoCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBusApp
 
BusAppEjbCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBusApp
 
BusAppServiceCE - Static variable in interface org.primordion.xholon.common.mechanism.CeBusApp
 
ButtonCE - Static variable in interface org.primordion.user.xmiapps.Elevator.CeElevator
 
ButtonGroupCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
ButtonModelCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
ButtonUICE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
bvarCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 

C

C_CE - Static variable in interface org.primordion.xholon.common.mechanism.CeXBar
 
C_CEL_ACE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
C_dilutionCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCircadianClock
 
C_FEM_ACE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
C_FEM_ECE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
C_FPL_ACE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
C_JEV_HCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
C_PLU_ACE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
C_PLU_LCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
C_PLU_UCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
C_PLU_XCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
C_PLUCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
C_POS_BCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
C_POS_ECE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
C_REF_XCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
C_transport_backwardCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCircadianClock
 
C_transport_forwardCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCircadianClock
 
ca() - Method in class org.primordion.xholon.base.PatchOwner
Clear patches, turtles, etc.
CaCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
cacheIXholonAttributes() - Method in class org.primordion.xholon.app.Application
Temporarily set attributes that ref IXholon nodes, to null.
calculusCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
CallActionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
CallBehaviorActionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
CallButtonCE - Static variable in interface org.primordion.user.xmiapps.Elevator.CeElevator
 
CallOperationActionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
canAdjustOptions() - Method in class org.primordion.ef.AbstractXholon2ExternalFormat
 
canAdjustOptions() - Method in class org.primordion.ef.Xholon2Svg
 
canAdjustOptions() - Method in interface org.primordion.xholon.service.ef.IXholon2ExternalFormat
Is this external format writer capable of allowing the user to change the values of options.
cancel(XholonTimerTask) - Method in interface org.primordion.xholon.base.IXholonTime
Cancel a relative, repeat or absolute timeout.
cancel(XholonTimerTask) - Method in class org.primordion.xholon.base.XholonTime
 
cancel() - Method in class org.primordion.xholon.base.XholonTimerTask
 
cancelAll() - Method in interface org.primordion.xholon.base.IXholonTime
Cancel all timeouts.
cancelAll() - Method in class org.primordion.xholon.base.XholonTime
 
cancelCE - Static variable in interface org.primordion.xholon.common.mechanism.CeScxmlEntity
 
canMove(double) - Method in interface org.primordion.xholon.base.ITurtle
Can this turtle legally move the specified distance, given its current heading?
canMove(double) - Method in class org.primordion.xholon.base.Turtle
 
CanvasCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
CapillaryCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
capture(double) - Method in class org.primordion.xholon.io.AbstractChartViewer
 
capture(int, double, double[]) - Method in class org.primordion.xholon.io.AbstractChartViewer
 
capture(double) - Method in class org.primordion.xholon.io.ChartViewerC3
 
capture(int, double, double[]) - Method in class org.primordion.xholon.io.ChartViewerC3
Used only by some of the ealontro models.
capture(double) - Method in class org.primordion.xholon.io.ChartViewerGnuplot
 
capture(int, double, double[]) - Method in class org.primordion.xholon.io.ChartViewerGnuplot
 
capture(double) - Method in class org.primordion.xholon.io.ChartViewerGoogle2
 
capture(int, double, double[]) - Method in class org.primordion.xholon.io.ChartViewerGoogle2
Used only by some of the ealontro models.
capture(double) - Method in class org.primordion.xholon.io.ChartViewerNVD3
 
capture(int, double, double[]) - Method in class org.primordion.xholon.io.ChartViewerNVD3
Used only by some of the ealontro models.
capture(double) - Method in interface org.primordion.xholon.io.IChartViewer
Capture data at each timestep.
capture(int, double, double[]) - Method in interface org.primordion.xholon.io.IChartViewer
Capture specified data at each time interval.
capture(Object, String) - Method in interface org.primordion.xholon.service.timeline.ITimelineViewer
 
capture(Object, String) - Method in class org.primordion.xholon.service.timeline.TimelineViewerChapJSON
 
CarbonCycleSystemCE - Static variable in interface org.primordion.user.app.climatechange.carboncycle03.Cecarboncycle03
 
CarbonDioxide - Class in org.primordion.user.app.climatechange.model04
Carbon Dioxide (CO2) is a greenhouse gas (GHG).
CarbonDioxide() - Constructor for class org.primordion.user.app.climatechange.model04.CarbonDioxide
 
CarbonDioxideCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CarboxylGroupCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CarCE - Static variable in interface org.primordion.dynsys.app.CeTrain
 
Card - Class in org.primordion.user.app.Risk
A player receives a card every turn that she/he/it conquers one or more territories.
Card() - Constructor for class org.primordion.user.app.Risk.Card
 
cardCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
CardConstraintsCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
CardiacCellModelCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
CardLayoutCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
Cards - Class in org.primordion.user.app.Risk
Cards is a container for Card objects.
Cards() - Constructor for class org.primordion.user.app.Risk.Cards
 
CartCE - Static variable in interface org.primordion.ealontro.app.CartCentering.CeCartCentering
 
CartCenteringCE - Static variable in interface org.primordion.ealontro.app.CartCentering.CeCartCentering
 
CartCenteringSystemCE - Static variable in interface org.primordion.ealontro.app.CartCentering.CeCartCentering
 
cartesianproductCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
caRuleNumber - Static variable in class org.primordion.user.app.Simple1d.Xh1dSimple
 
Cat - Class in org.primordion.user.app.Bestiary
Cat
Cat() - Constructor for class org.primordion.user.app.Bestiary.Cat
 
CatBehaviorCE - Static variable in interface org.primordion.user.app.Bestiary.CeBestiary
 
CatCE - Static variable in interface org.primordion.user.app.Bestiary.CeBestiary
 
CategoryCE - Static variable in interface org.primordion.xholon.common.mechanism.CeXBar
 
CccCE - Static variable in interface org.primordion.user.app.TweenTrees.CeTweenTrees
 
CCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCircadianClock
 
cCE - Static variable in interface org.primordion.memcomp.app.CoopPSys00ex0.CeCoopPSys00ex0
 
cCE - Static variable in interface org.primordion.memcomp.app.CoopSys02ex32_1.CeCoopSys02ex32_1
 
cCE - Static variable in interface org.primordion.memcomp.app.CoopSys02ex343_2.CeCoopSys02ex343_2
 
cCE - Static variable in interface org.primordion.memcomp.app.Fsm06ex1.CeFsm06ex1
 
cCE - Static variable in interface org.primordion.memcomp.app.SymAnti02ex41.CeSymAnti02ex41
 
CCE - Static variable in interface org.primordion.user.app.azimuth.pn01.Cepn
 
CCE - Static variable in interface org.primordion.user.app.petrinet.feinberg1.Cefeinberg1
 
CCE - Static variable in interface org.primordion.xholon.common.mechanism.CeXBar
 
cd() - Method in interface org.primordion.ctrnn.AdapSysLab.Resources
 
cd() - Method in interface org.primordion.dynsys.app.leakybucket.Resources
 
cd() - Method in interface org.primordion.dynsys.app.stability.Resources
 
cd() - Method in interface org.primordion.user.app.azimuth.pn01.Resources
 
cd() - Method in interface org.primordion.user.app.Bestiary.Resources
 
cd() - Method in interface org.primordion.user.app.bigraph.roomsghosts.Resources
 
cd() - Method in interface org.primordion.user.app.climatechange.igm.Resources
 
cd() - Method in interface org.primordion.user.app.climatechange.mdcs.m2_1mp.Resources
 
cd() - Method in interface org.primordion.user.app.climatechange.mdcs.m2_2mp.Resources
 
cd() - Method in interface org.primordion.user.app.climatechange.solarsystemtest.Resources
 
cd() - Method in interface org.primordion.user.app.petrinet.feinberg1.Resources
 
cd() - Method in interface org.primordion.user.app.solarsystem.Resources
 
cd() - Method in interface org.primordion.user.app.testNodePorts.Resources
 
cd() - Method in interface org.primordion.user.app.Turnstile.Resources
 
cd() - Method in interface org.primordion.xholon.app.Chameleon.Resources
 
cd() - Method in interface org.primordion.xholon.app.Furcifer.Resources
 
cd() - Method in class org.primordion.xholon.base.PatchOwner
Clear the drawing surface.
CD_CONFIG - Static variable in class org.primordion.xholon.base.ContainmentData
ex: CGmt CD.xml
CD_NUMBER - Static variable in class org.primordion.xholon.base.ContainmentData
ex: V(pheneVal)n100000 CSH.xml
CD_PORT - Static variable in class org.primordion.xholon.base.ContainmentData
ex: port[P_SM_PRD1]="#xpointer(ancestor::Cytoplasm/Cytosol/Pyruvate)"
CD_RANDOM - Static variable in class org.primordion.xholon.base.ContainmentData
ex: V(val)r CSH.xml
CD_REPLICATION - Static variable in class org.primordion.xholon.base.ContainmentData
ex: port[Ticks0]{1}{false}{}{SOUT_TICK,}^replication[0]="#xpointer(ancestor::Hoist)"
CD_SEPARATOR - Static variable in class org.primordion.xholon.base.ContainmentData
ex: port[ONE]="..."^port[TWO]="..."^
CD_VARIABLE - Static variable in class org.primordion.xholon.base.ContainmentData
ex: V(val)r V(avgVehicleKilometers)n5551V(proportionLicensed)n0.492
CDSECT - Static variable in interface org.primordion.xholon.io.xml.IXmlReader
CDSECT event type.
Ce09SpatialGames - Interface in org.primordion.user.app.SpatialGames
 
Ce1dSimple - Interface in org.primordion.user.app.Simple1d
 
Ce__XholonTemplate__ - Interface in org.primordion.user.xmiapps.__XholonTemplate__
 
CeAction - Interface in org.primordion.xholon.common.mechanism
 
CeAdapSysLab - Interface in org.primordion.ctrnn.AdapSysLab
 
CeAnnotation - Interface in org.primordion.xholon.common.mechanism
 
CeAntForaging - Interface in org.primordion.ealontro.app.AntForaging
 
CeAntTrail - Interface in org.primordion.ealontro.app.EcjAntTrail
 
CeAppClient - Interface in org.primordion.xholon.common.mechanism
 
CeAttribute - Interface in org.primordion.xholon.common.mechanism
 
CeBeard2005_UML_Xholon_Step4_v1 - Interface in org.primordion.user.xmiapps.beard41
 
CeBehavior - Interface in org.primordion.xholon.common.mechanism
 
CeBestiary - Interface in org.primordion.user.app.Bestiary
 
CeBpmn_Entity - Interface in org.primordion.xholon.common.mechanism
 
CeBraneCalc1 - Interface in org.primordion.memcomp.app.BraneCalc1
 
CeBrusselator - Interface in org.primordion.cellontro.app.sbml
 
CeBusApp - Interface in org.primordion.xholon.common.mechanism
 
Cecarboncycle03 - Interface in org.primordion.user.app.climatechange.carboncycle03
 
CeCartCentering - Interface in org.primordion.ealontro.app.CartCentering
 
CeCellModel - Interface in org.primordion.cellontro.app.sbml
 
CeChameleon - Interface in org.primordion.xholon.app.Chameleon
 
CeCircadianClock - Interface in org.primordion.cellontro.app.sbml
 
CeControl - Interface in org.primordion.xholon.common.mechanism
 
CeCoopPSys00ex0 - Interface in org.primordion.memcomp.app.CoopPSys00ex0
 
CeCoopSys02ex32_1 - Interface in org.primordion.memcomp.app.CoopSys02ex32_1
 
CeCoopSys02ex343_1 - Interface in org.primordion.memcomp.app.CoopSys02ex343_1
 
CeCoopSys02ex343_2 - Interface in org.primordion.memcomp.app.CoopSys02ex343_2
 
CeDataPlotter - Interface in org.primordion.xholon.common.viewer
 
CeDfdEntity - Interface in org.primordion.xholon.common.mechanism
 
CeDimericMWCstiff - Interface in org.primordion.cellontro.app.sbml
 
CeElevator - Interface in org.primordion.user.xmiapps.Elevator
 
CeEnglish2French - Interface in org.primordion.user.app.English2French
 
Cefeinberg1 - Interface in org.primordion.user.app.petrinet.feinberg1
 
CeFibonacci - Interface in org.primordion.dynsys.app
 
CeFsm06ex1 - Interface in org.primordion.memcomp.app.Fsm06ex1
 
CeFsm06ex1_Fsm - Interface in org.primordion.memcomp.app.Fsm06ex1_Fsm
 
CeFsm06ex1_Fsm - Interface in org.primordion.user.xmiapps.Fsm06ex1_Fsm
 
CeFurcifer - Interface in org.primordion.xholon.app.Furcifer
 
CeGameOfLife - Interface in org.primordion.user.app.GameOfLife
 
CeGlycolysis - Interface in org.primordion.cellontro.app.sbml
 
CeGraphicalNetworkViewer - Interface in org.primordion.xholon.common.viewer
 
CeGraphicalTreeViewer - Interface in org.primordion.xholon.common.viewer
 
CeGravity1 - Interface in org.primordion.dynsys.app
 
CeGridViewer - Interface in org.primordion.xholon.common.viewer
 
CeHelloWorld - Interface in org.primordion.user.app.HelloWorld_TestTime
 
CeHelloWorld - Interface in org.primordion.user.app.helloworldjnlp
 
CeHelloWorldTutorial - Interface in org.primordion.user.xmiapps.HelloWorldTutorial
 
CeHelloWorldTutorial - Interface in org.primordion.user.xmiappsArgoUML
 
CeHelloWorldTutorial - Interface in org.primordion.user.xmiappsTc.HelloWorldTutorial
 
CeHelloWorldTutorial_multiWorld - Interface in org.primordion.user.xmiapps.HelloWorldTutorial_multiWorld
 
CeHelloWorldTutorial_plus - Interface in org.primordion.user.xmiapps.HelloWorldTutorial_plus
 
CeHelloWorldTutorial_universe - Interface in org.primordion.user.xmiapps.HelloWorldTutorial_universe
 
CeHelloWorldTutorialSysML - Interface in org.primordion.user.xmiappsTcSysML
 
CeHex - Interface in org.primordion.user.app.Hex
 
CeHistogramViewer - Interface in org.primordion.xholon.common.viewer
 
Ceigm - Interface in org.primordion.user.app.climatechange.igm
 
ceilingCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
CeInteractions - Interface in org.primordion.xholon.common.viewer
 
CeInterest - Interface in org.primordion.dynsys.app
 
CeJpdl_Entity - Interface in org.primordion.xholon.common.mechanism
 
CelestialBodyCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CeliacGanglionCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CeLife - Interface in org.primordion.cellontro.app
 
CeListener - Interface in org.primordion.xholon.common.mechanism
 
CellBilayerCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CellBilayerCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
cellCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCircadianClock
 
cellCE - Static variable in interface org.primordion.cellontro.app.sbml.CeDimericMWCstiff
 
CellConstraintsCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
CellEditorCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
CellLocations - Class in org.primordion.cellontro.io.vrml
VRML CellLocations.
CellLocations() - Constructor for class org.primordion.cellontro.io.vrml.CellLocations
Constructor.
CellMembraneCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CellMembraneCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
Cellontro2Sbml - Class in org.primordion.cellontro.io.sbml
Cellontro2Sbml transforms Xholon runtime models into SBML Level 2 files.
Cellontro2Sbml() - Constructor for class org.primordion.cellontro.io.sbml.Cellontro2Sbml
Constructor.
Cellontro2Sbml(String, String, IXholon) - Constructor for class org.primordion.cellontro.io.sbml.Cellontro2Sbml
Constructor.
Cellontro_bilayer() - Method in interface org.client.RCImages
 
Cellontro_container() - Method in interface org.client.RCImages
 
Cellontro_enzyme() - Method in interface org.client.RCImages
 
Cellontro_substrate() - Method in interface org.client.RCImages
 
CellularAutomaton1DCE - Static variable in interface org.primordion.user.app.Simple1d.Ce1dSimple
 
CellularSolutionCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CellularSpaceCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CellWallCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CeLongRunner - Interface in org.primordion.xholon.common.mechanism
 
Celsius - Class in org.primordion.user.app.climatechange.mdcs.m2_1mp
 
Celsius() - Constructor for class org.primordion.user.app.climatechange.mdcs.m2_1mp.Celsius
 
Celsius - Class in org.primordion.user.app.climatechange.mdcs.m2_2mp
 
Celsius() - Constructor for class org.primordion.user.app.climatechange.mdcs.m2_2mp.Celsius
 
CeMathML - Interface in org.primordion.xholon.mech.mathml
 
Cemdcs - Interface in org.primordion.user.app.climatechange.mdcs.m2_1mp
 
Cemdcs - Interface in org.primordion.user.app.climatechange.mdcs.m2_2mp
 
CeMeTTTa - Interface in org.primordion.user.app.MeTTTa
 
Cemodel04 - Interface in org.primordion.user.app.climatechange.model04
 
CentralBufferNodeCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActivityEntity
 
CentralNervousSystemCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CentralNeuronCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CentralNodeCE - Static variable in interface org.primordion.user.app.RavaszHnm.CeRavaszHnm
 
CeOrNode - Interface in org.primordion.xholon.common.mechanism
 
CeOrNodeSample - Interface in org.primordion.user.app.OrNode
 
CePetriNetEntity - Interface in org.primordion.xholon.common.mechanism
 
Cepn - Interface in org.primordion.user.app.azimuth.pn01
 
CePort - Interface in org.primordion.xholon.common.mechanism
 
CeProvidedRequiredTest - Interface in org.primordion.user.xmiapps.ProvidedRequiredTest
 
CeRavaszHnm - Interface in org.primordion.user.app.RavaszHnm
 
CeRcs1 - Interface in org.primordion.user.app.rcs.Rcs1
 
CeRcs2 - Interface in org.primordion.user.app.rcs.Rcs2
 
CeRcs_GP_FSM - Interface in org.primordion.user.xmiapps.Rcs_GP_FSM
 
CeRcs_GP_FSM_Grid - Interface in org.primordion.user.xmiapps.Rcs_GP_FSM_Grid
 
CeRcs_GP_MM - Interface in org.primordion.user.xmiapps.Rcs_GP_MM
 
CeRcs_GP_MM_NoSymbols - Interface in org.primordion.user.xmiapps.Rcs_GP_MM_NoSymbols
 
CerebellumCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CerebralCortexCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CerebrumCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CeRed - Interface in org.primordion.user.app.Red
 
CeRisk - Interface in org.primordion.user.app.Risk
 
CeRole - Interface in org.primordion.xholon.common.mechanism
 
Ceroomsghosts - Interface in org.primordion.user.app.bigraph.roomsghosts
 
CeScheffranNActor - Interface in org.primordion.dynsys.app
 
CeScheffranTwoActor - Interface in org.primordion.dynsys.app
 
CeScxmlEntity - Interface in org.primordion.xholon.common.mechanism
 
CeSnapshot - Interface in org.primordion.xholon.common.viewer
 
Cesolarsystemtest - Interface in org.primordion.user.app.climatechange.solarsystemtest
 
CeSpringIdol - Interface in org.primordion.user.app.SpringIdol
 
CeStateMachineEntity - Interface in org.primordion.xholon.common.mechanism
 
CeStateMachineOnly - Interface in org.primordion.user.xmiappsTc.StateMachineOnly
 
CeStopWatch - Interface in org.primordion.user.xmiapps.StopWatch
 
CeStopWatch_Xhym - Interface in org.primordion.user.xmiapps.StopWatch_Xhym
 
CeStupidModel1 - Interface in org.primordion.user.app.StupidModel.sm1
 
CeStupidModel10 - Interface in org.primordion.user.app.StupidModel.sm10
 
CeStupidModel11 - Interface in org.primordion.user.app.StupidModel.sm11
 
CeStupidModel12 - Interface in org.primordion.user.app.StupidModel.sm12
 
CeStupidModel13 - Interface in org.primordion.user.app.StupidModel.sm13
 
CeStupidModel14 - Interface in org.primordion.user.app.StupidModel.sm14
 
CeStupidModel15 - Interface in org.primordion.user.app.StupidModel.sm15
 
CeStupidModel16 - Interface in org.primordion.user.app.StupidModel.sm16
 
CeStupidModel16nl - Interface in org.primordion.user.app.StupidModel.sm16nl
 
CeStupidModel2 - Interface in org.primordion.user.app.StupidModel.sm2
 
CeStupidModel3 - Interface in org.primordion.user.app.StupidModel.sm3
 
CeStupidModel4 - Interface in org.primordion.user.app.StupidModel.sm4
 
CeStupidModel5 - Interface in org.primordion.user.app.StupidModel.sm5
 
CeStupidModel5tg - Interface in org.primordion.user.app.StupidModel.sm5tg
 
CeStupidModel6 - Interface in org.primordion.user.app.StupidModel.sm6
 
CeStupidModel7 - Interface in org.primordion.user.app.StupidModel.sm7
 
CeStupidModel8 - Interface in org.primordion.user.app.StupidModel.sm8
 
CeStupidModel9 - Interface in org.primordion.user.app.StupidModel.sm9
 
CeSwingAttribute - Interface in org.primordion.xholon.common.viewer
 
CeSwingEntity - Interface in org.primordion.xholon.common.viewer
 
CeSymAnti02ex41 - Interface in org.primordion.memcomp.app.SymAnti02ex41
 
CeTest1 - Interface in org.primordion.user.app.mathmltest1
 
CeTestFsm - Interface in org.primordion.user.xmiapps.TestFsm
 
CeTestFsmForkJoin - Interface in org.primordion.user.xmiapps.TestFsmForkJoin
 
CeTestFsmHistory - Interface in org.primordion.user.xmiapps.TestFsmHistory
 
CeTestFsmJunction - Interface in org.primordion.user.xmiapps.TestFsmJunction
 
CeTestFsmKW - Interface in org.primordion.user.app.TestFsm
 
CeTestFsmOrthogonal - Interface in org.primordion.user.xmiapps.TestFsmOrthogonal
 
CetestNodePorts - Interface in org.primordion.user.app.testNodePorts
 
CeTextTree - Interface in org.primordion.xholon.common.viewer
 
CeTrain - Interface in org.primordion.dynsys.app
 
CeTurnstile - Interface in org.primordion.user.app.Turnstile
 
CeTurtleExample1 - Interface in org.primordion.user.app.TurtleExample1
 
CeTutorial4 - Interface in org.primordion.ealontro.app.EcjTutorial4
 
CeTweenTrees - Interface in org.primordion.user.app.TweenTrees
 
CeUid - Interface in org.primordion.xholon.common.mechanism
 
CeUMLActionEntity - Interface in org.primordion.xholon.common.mechanism
 
CeUMLActivityEntity - Interface in org.primordion.xholon.common.mechanism
 
CeVrml - Interface in org.primordion.xholon.common.viewer
 
CeWatch - Interface in org.primordion.user.xmiapps.Watch
 
CeWaterLogic - Interface in org.primordion.user.app.WaterLogic
 
CeWolfSheepGrass - Interface in org.primordion.user.app.WolfSheepGrass
 
CeXBar - Interface in org.primordion.user.app.XBar
 
CeXBar - Interface in org.primordion.xholon.common.mechanism
 
CeXBar_ex1 - Interface in org.primordion.user.app.XBar
 
CeXholonCollection - Interface in org.primordion.xholon.common.mechanism
 
CeXholonFramework - Interface in org.primordion.xholon.common.mechanism
 
CeXholonMechanism - Interface in org.primordion.xholon.common.mechanism
 
CeXholonService - Interface in org.primordion.xholon.common.mechanism
 
CeXholonViewer - Interface in org.primordion.xholon.common.viewer
 
CeXhymEntity - Interface in org.primordion.xholon.common.viewer
 
CeXPath - Interface in org.primordion.xholon.common.mechanism
 
CeYeastGlyPritchardKel - Interface in org.primordion.cellontro.app.sbml
 
Cfc11 - Class in org.primordion.user.app.climatechange.model04
CFC-11 (a halocarbon) is a greenhouse gas (GHG).
Cfc11() - Constructor for class org.primordion.user.app.climatechange.model04.Cfc11
 
Cfc12 - Class in org.primordion.user.app.climatechange.model04
CFC-12 (a halocarbon) is a greenhouse gas (GHG).
Cfc12() - Constructor for class org.primordion.user.app.climatechange.model04.Cfc12
 
ChameleonCE - Static variable in interface org.primordion.xholon.app.Chameleon.CeChameleon
 
chart() - Method in class org.primordion.xholon.io.AbstractChartViewer
 
chart(double[]) - Method in class org.primordion.xholon.io.AbstractHistogramViewer
 
chart() - Method in class org.primordion.xholon.io.AbstractHistogramViewer
 
chart() - Method in class org.primordion.xholon.io.ChartViewerC3
 
chart(boolean) - Method in class org.primordion.xholon.io.ChartViewerC3
 
chart() - Method in class org.primordion.xholon.io.ChartViewerGnuplot
 
chart(boolean) - Method in class org.primordion.xholon.io.ChartViewerGnuplot
 
chart() - Method in class org.primordion.xholon.io.ChartViewerGoogle2
 
chart(boolean) - Method in class org.primordion.xholon.io.ChartViewerGoogle2
 
chart() - Method in class org.primordion.xholon.io.ChartViewerNVD3
 
chart(boolean) - Method in class org.primordion.xholon.io.ChartViewerNVD3
 
chart(double[]) - Method in class org.primordion.xholon.io.HistogramViewerD3
 
chart(double[]) - Method in class org.primordion.xholon.io.HistogramViewerGnuplot
 
chart(double[]) - Method in class org.primordion.xholon.io.HistogramViewerGoogle2
 
chart() - Method in interface org.primordion.xholon.io.IChartViewer
Produce a chart from the captured data.
chart(boolean) - Method in interface org.primordion.xholon.io.IChartViewer
Produce a chart from the captured data.
chart(double[]) - Method in interface org.primordion.xholon.io.IHistogramViewer
Produce a histogram chart.
chart() - Method in interface org.primordion.xholon.io.IHistogramViewer
Produce a histogram chart.
ChartViewerC3 - Class in org.primordion.xholon.io
Captures data, and displays the data in a web browser as a C3.js line chart.
ChartViewerC3() - Constructor for class org.primordion.xholon.io.ChartViewerC3
default constructor
ChartViewerGnuplot - Class in org.primordion.xholon.io
Captures data, and creates a script to display the data in a gnuplot chart.
ChartViewerGnuplot() - Constructor for class org.primordion.xholon.io.ChartViewerGnuplot
default constructor
ChartViewerGoogle2 - Class in org.primordion.xholon.io
Captures data, and displays the data in a web browser as a Google chart.
ChartViewerGoogle2() - Constructor for class org.primordion.xholon.io.ChartViewerGoogle2
default constructor
ChartViewerNVD3 - Class in org.primordion.xholon.io
Captures data, and displays the data in a web browser as a NVD3.js line chart.
ChartViewerNVD3() - Constructor for class org.primordion.xholon.io.ChartViewerNVD3
default constructor
ChartViewerService - Class in org.primordion.xholon.service
A service that creates line charts.
ChartViewerService() - Constructor for class org.primordion.xholon.service.ChartViewerService
 
ChartViewerServiceCE - Static variable in interface org.primordion.xholon.common.mechanism.CeXholonService
 
chemistryNetBasicA05opt() - Method in interface org.primordion.user.app.azimuth.pn01.Resources
 
CherryTreeStrWriter - Class in org.primordion.xholon.io.cherrytree
A concrete class that knows how to write a Cherry Tree XML (.ctd) file through a Stax writer.
CherryTreeStrWriter() - Constructor for class org.primordion.xholon.io.cherrytree.CherryTreeStrWriter
default constructor
CherryTreeWriterFactory - Class in org.primordion.xholon.io.cherrytree
This factory creates new instances of XmlWriter (CherryTreeStaxWriter).
CherryTreeWriterFactory() - Constructor for class org.primordion.xholon.io.cherrytree.CherryTreeWriterFactory
 
ChloroplastBilayerCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
ChloroplastCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
ChloroplastDualMembraneCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
ChloroplastFluidCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
ChloroplastIntermembraneSpaceCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
ChloroplastMembraneCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CholesterolCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CholineCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
ChromosomeCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
ChronographControlCE - Static variable in interface org.primordion.user.xmiapps.Watch.CeWatch
 
Ci - Class in org.primordion.xholon.mech.mathml.content
MathML 2.0 - ci
Ci() - Constructor for class org.primordion.xholon.mech.mathml.content.Ci
 
ciCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
CircleMarkerCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
CirculatorySystemCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CisternaeCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CisternalSpaceCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CitrateCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CitrateCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
CitrateSynthaseCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CitrateSynthaseCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
ClassACE - Static variable in interface org.primordion.user.xmiapps.ProvidedRequiredTest.CeProvidedRequiredTest
 
ClassBCE - Static variable in interface org.primordion.user.xmiapps.ProvidedRequiredTest.CeProvidedRequiredTest
 
ClassCCE - Static variable in interface org.primordion.user.xmiapps.ProvidedRequiredTest.CeProvidedRequiredTest
 
ClassHelper - Class in org.primordion.xholon.util
Class Helper
ClassHelper() - Constructor for class org.primordion.xholon.util.ClassHelper
 
CLASSID_NOT_FOUND - Static variable in interface org.primordion.xholon.base.IInheritanceHierarchy
 
cleanup() - Method in class org.primordion.user.app.HelloWorld_TestTime.XhHelloWorld_TestTime
 
cleanup() - Method in interface org.primordion.xholon.base.IXholon
Do any required cleanup work once the application has stopped executing.
cleanup() - Method in class org.primordion.xholon.base.Xholon
 
cleanup() - Method in class org.primordion.xholon.util.XholonTreeNode
 
clear() - Method in class org.primordion.xholon.base.XholonList
 
clear() - Method in class org.primordion.xholon.base.XholonMap
 
clear() - Method in class org.primordion.xholon.service.XholonDirectoryService
Remove all entries.
clear() - Method in class org.primordion.xholon.util.XholonSortedNode
 
clearAll() - Method in class org.primordion.xholon.base.PatchOwner
Clear patches, turtles, etc.
clearConsole() - Method in class org.primordion.xholon.app.Application
 
clearConsoleContents() - Static method in class org.primordion.xholon.io.XholonGwtTabPanelHelper
Remove all children of the root "xhconsole" element.
clearDrawing() - Method in class org.primordion.xholon.base.PatchOwner
Clear the drawing surface.
clearGrid() - Method in class org.primordion.user.app.MeTTTa.MeTTTaModel
Clear the TTT grid, and set number of positions played to 0.
clearPatches() - Method in class org.primordion.xholon.base.PatchOwner
Set all patch variables to their initial values.
ClearStructuralFeatureActionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
clearTurtles() - Method in class org.primordion.xholon.base.PatchOwner
Kill all turtles within the scope of this PatchOwner.
ClearVariableActionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
ClimateChangeSystemCE - Static variable in interface org.primordion.user.app.climatechange.model04.Cemodel04
 
ClipboardFactory - Class in org.primordion.xholon.service.xholonhelper
Factory that returns an object (IClipboard) that can interact with the Java clipboard.
clone(IXholon) - Method in class org.primordion.xholon.base.Activity
Clone this instance of Activity, with cloned children as well.
ClosedBracket - Class in org.primordion.user.app.English2French
 
ClosedBracket() - Constructor for class org.primordion.user.app.English2French.ClosedBracket
 
ClosedBracketCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
ClosedEllipseCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
CM_jjCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
CM_nnCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
CM_npCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
CM_ppCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
CM_vcCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
CM_vvCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
CM_xxCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
CmpCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
Cn - Class in org.primordion.xholon.mech.mathml.content
MathML 2.0 - cn
Cn() - Constructor for class org.primordion.xholon.mech.mathml.content.Cn
 
Cn_dilutionCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCircadianClock
 
CnCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCircadianClock
 
cnCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
CNPT_OUTGOING1 - Static variable in class org.primordion.xholon.base.StateMachineEntity
 
CNPT_OUTGOING10 - Static variable in class org.primordion.xholon.base.StateMachineEntity
 
CNPT_OUTGOING2 - Static variable in class org.primordion.xholon.base.StateMachineEntity
 
CNPT_OUTGOING3 - Static variable in class org.primordion.xholon.base.StateMachineEntity
 
CNPT_OUTGOING4 - Static variable in class org.primordion.xholon.base.StateMachineEntity
 
CNPT_OUTGOING5 - Static variable in class org.primordion.xholon.base.StateMachineEntity
 
CNPT_OUTGOING6 - Static variable in class org.primordion.xholon.base.StateMachineEntity
 
CNPT_OUTGOING7 - Static variable in class org.primordion.xholon.base.StateMachineEntity
 
CNPT_OUTGOING8 - Static variable in class org.primordion.xholon.base.StateMachineEntity
 
CNPT_OUTGOING9 - Static variable in class org.primordion.xholon.base.StateMachineEntity
 
CNPT_TARGET - Static variable in class org.primordion.xholon.base.StateMachineEntity
 
CO2CE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
CO2CE - Static variable in interface org.primordion.user.app.azimuth.pn01.Cepn
 
codomainCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
coin1 - Static variable in class org.primordion.user.app.Turnstile.XhTurnstile
 
ColonCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
color - Variable in class org.primordion.xholon.base.Turtle
 
COLOR_ALGORITHM_POS - Static variable in class org.primordion.ef.other.Xholon2GoogleTreeMap
color value is based roughly on the node's position in the tree, relative to immediate neighbors
COLOR_ALGORITHM_XHCID - Static variable in class org.primordion.ef.other.Xholon2GoogleTreeMap
color value is the ID of the node's XholonClass
colorActiveState - Static variable in class org.primordion.user.app.Turnstile.XhTurnstile
 
ColorChooserUICE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
colorInactiveState - Static variable in class org.primordion.user.app.Turnstile.XhTurnstile
 
colorTerritories() - Method in class org.primordion.user.app.Risk.GameView
Color all territories to show which player owns each one.
colorTerritory(Territory) - Method in class org.primordion.user.app.Risk.GameView
Color one territory to show which player owns it.
ComboBoxModelCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
ComboBoxUICE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
COMMANDID_HATCH - Static variable in class org.primordion.user.app.WolfSheepGrass.WolfSheep
 
COMMANDID_NONE - Static variable in interface org.primordion.xholon.base.IPatch
 
COMMANDID_NONE - Static variable in interface org.primordion.xholon.base.ITurtle
 
COMMENT - Static variable in interface org.primordion.xholon.io.xml.IXmlReader
Comment event type.
compareTo(Object) - Method in class org.primordion.user.app.English2French.Lexeme
 
compareTo(Object) - Method in class org.primordion.user.app.English2French.Transform
 
compareTo(Object) - Method in class org.primordion.user.app.StupidModel.sm10.BugStupidModel10
 
compareTo(Object) - Method in class org.primordion.user.app.StupidModel.sm11.BugStupidModel11
 
compareTo(Object) - Method in class org.primordion.user.app.StupidModel.sm12.BugStupidModel12
 
compareTo(Object) - Method in class org.primordion.user.app.StupidModel.sm13.BugStupidModel13
 
compareTo(Object) - Method in class org.primordion.user.app.StupidModel.sm14.BugStupidModel14
 
compareTo(Object) - Method in class org.primordion.user.app.StupidModel.sm15.BugStupidModel15
 
compareTo(Object) - Method in class org.primordion.user.app.StupidModel.sm16.BugStupidModel16
 
compareTo(Object) - Method in class org.primordion.user.app.StupidModel.sm16nl.BugStupidModel16nl
 
compareTo(Object) - Method in class org.primordion.xholon.base.Mechanism
 
compareTo(Object) - Method in class org.primordion.xholon.base.Xholon
 
compareTo(Object) - Method in class org.primordion.xholon.base.XholonClass
 
compartmentCE - Static variable in interface org.primordion.cellontro.app.sbml.CeBrusselator
 
compartmentCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
CompletionDetectorCE - Static variable in interface org.primordion.memcomp.app.CoopPSys00ex0.CeCoopPSys00ex0
 
CompletionDetectorCE - Static variable in interface org.primordion.memcomp.app.CoopSys02ex32_1.CeCoopSys02ex32_1
 
CompletionDetectorCE - Static variable in interface org.primordion.memcomp.app.CoopSys02ex343_1.CeCoopSys02ex343_1
 
CompletionDetectorCE - Static variable in interface org.primordion.memcomp.app.CoopSys02ex343_2.CeCoopSys02ex343_2
 
CompletionDetectorCE - Static variable in interface org.primordion.memcomp.app.Fsm06ex1.CeFsm06ex1
 
CompletionDetectorCE - Static variable in interface org.primordion.memcomp.app.SymAnti02ex41.CeSymAnti02ex41
 
complexesCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
ComplexICE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
ComplexIIICE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
ComplexIVCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
ComponentCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
ComponentUICE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
composeCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
CompoundBorderCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
CompoundCE - Static variable in interface org.primordion.user.app.azimuth.pn01.Cepn
 
CompoundsCE - Static variable in interface org.primordion.user.app.azimuth.pn01.Cepn
 
ComputerPlayer - Class in org.primordion.user.app.Risk
An automated player.
ComputerPlayer() - Constructor for class org.primordion.user.app.Risk.ComputerPlayer
 
ConditionalNodeCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
conditionCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
ConeCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
ConeOuterSegmentCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
ConfigurationAgentCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
configure() - Method in class org.primordion.cellontro.app.sbml.XhAbstractSbml
 
configure() - Method in class org.primordion.cellontro.app.XhCell
 
configure() - Method in class org.primordion.cellontro.app.XhCellAutop
 
configure() - Method in class org.primordion.cellontro.app.XhLife
 
configure(String, int) - Method in class org.primordion.cellontro.app.XhLife
 
configure() - Method in class org.primordion.cellontro.base.BioXholonClass
 
configure() - Method in class org.primordion.user.app.Collisions.XhCollisions
 
configure() - Method in class org.primordion.user.app.Generic.XhGeneric
 
configure() - Method in class org.primordion.user.xmiapps.beard41.XhBeard2005_UML_Xholon_Step4_v1
 
configure() - Method in class org.primordion.xholon.app.Chameleon.XhChameleon
 
configure() - Method in class org.primordion.xholon.app.Furcifer.XhFurcifer
 
configure(String, int) - Method in class org.primordion.xholon.base.AbstractGrid
 
configure() - Method in interface org.primordion.xholon.base.IXholon
Perform some action, typically once at start up; MAY be overridden.
configure(String, int) - Method in interface org.primordion.xholon.base.IXholon
Configure something based on a configure instruction.
configure() - Method in class org.primordion.xholon.base.Mechanism
 
configure() - Method in class org.primordion.xholon.base.StateMachineEntity
 
configure(String, int) - Method in class org.primordion.xholon.base.Xholon
 
configure() - Method in class org.primordion.xholon.base.Xholon
 
configure() - Method in class org.primordion.xholon.base.XholonClass
 
configure() - Method in class org.primordion.xholon.base.XholonList
 
configure() - Method in class org.primordion.xholon.base.XholonMap
 
configure() - Method in class org.primordion.xholon.base.XholonWithPorts
 
configure() - Method in class org.primordion.xholon.script.port
 
configure() - Method in class org.primordion.xholon.util.XholonSortedNode
 
configurePorts(String, int) - Method in class org.primordion.xholon.base.XholonWithPorts
Configure ports.
ConjCE - Static variable in interface org.primordion.xholon.common.mechanism.CeXBar
 
conjugateCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
ConnectionCE - Static variable in interface org.primordion.ctrnn.AdapSysLab.CeAdapSysLab
 
ConnectionPointReferenceCE - Static variable in interface org.primordion.xholon.common.mechanism.CeStateMachineEntity
 
consoleLog(Object) - Method in interface org.primordion.xholon.base.IXholon
 
consoleLog(Object) - Method in class org.primordion.xholon.base.Xholon
 
consoleLogSme(Object) - Static method in class org.primordion.xholon.base.StateMachineEntity
 
ConstantlyStirredPotCE - Static variable in interface org.primordion.user.app.petrinet.feinberg1.Cefeinberg1
 
constantsCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
ConstraintsCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
CONSTRUCTOR_ARG - Static variable in interface org.primordion.xholon.base.IReflection
 
constructsCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
consumes(boolean) - Method in class org.fr.lri.swingstates.sm.StateMachine
Makes this state machine consume an event.
ContainerCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
ContainmentData - Class in org.primordion.xholon.base
ContainmentData is used at configuration time as a temporary holding place for data read in from a CompositeStructureHierarchy.xml file.
ContainmentData() - Constructor for class org.primordion.xholon.base.ContainmentData
 
contains(Object) - Method in class org.primordion.xholon.base.XholonList
 
contains(Object) - Method in class org.primordion.xholon.util.XholonSortedNode
 
containsAll(Collection) - Method in class org.primordion.xholon.base.XholonList
 
containsAll(Collection) - Method in class org.primordion.xholon.util.XholonSortedNode
 
containsKey(Object) - Method in class org.primordion.xholon.base.XholonMap
 
containsKey(String) - Method in class org.primordion.xholon.service.XholonDirectoryService
Check if the service contains a Object or IXholon instance that matches a String key.
containsValue(Object) - Method in class org.primordion.xholon.base.XholonMap
 
Continent - Class in org.primordion.user.app.Risk
A Continent contains multiple territories.
Continent() - Constructor for class org.primordion.user.app.Risk.Continent
 
Control - Class in org.primordion.xholon.base
Control for a Xholon application.
Control() - Constructor for class org.primordion.xholon.base.Control
 
Control_application_side_tree() - Method in interface org.client.RCImages
 
Control_bricks() - Method in interface org.client.RCImages
 
Control_bullet_blue() - Method in interface org.client.RCImages
 
Control_CompositeHierarchy() - Method in interface org.client.RCConfig
 
Control_control_fastforward_blue() - Method in interface org.client.RCImages
 
Control_control_pause_blue() - Method in interface org.client.RCImages
 
Control_control_play_blue() - Method in interface org.client.RCImages
 
Control_control_repeat_blue() - Method in interface org.client.RCImages
 
Control_control_rewind_blue() - Method in interface org.client.RCImages
 
Control_control_stop_blue() - Method in interface org.client.RCImages
 
Control_controller() - Method in interface org.client.RCImages
 
Control_layout_content() - Method in interface org.client.RCImages
 
Control_rainbow() - Method in interface org.client.RCImages
 
ControlCE - Static variable in interface org.primordion.xholon.common.mechanism.CeControl
 
ControlFlowCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActivityEntity
 
ControlNodeCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActivityEntity
 
convertHSVtoRGB(HSVType) - Method in class org.primordion.xholon.io.vrml.AbstractVrmlColor
Convert from HSV to RGB color model.
convertHSVtoRGB(HSVType) - Method in interface org.primordion.xholon.io.vrml.IVrmlColor
 
copySelf(IXholon) - Method in class org.primordion.xholon.service.xholonhelper.CutCopyPaste
 
copySelf(IXholon) - Method in interface org.primordion.xholon.service.xholonhelper.ICutCopyPaste
Do the actual work of copying the node to an XML String.
copySelf(IXholon) - Method in class org.primordion.xholon.service.XholonHelperService
 
copyStringToClipboard(String) - Method in interface org.primordion.xholon.service.xholonhelper.IClipboard
Copy a String to the cipboard.
copyStringToClipboard(String) - Method in class org.primordion.xholon.service.xholonhelper.XholonClipboard
 
copyToClipboard(IXholon) - Method in class org.primordion.xholon.service.xholonhelper.CutCopyPaste
 
copyToClipboard(IXholon) - Method in interface org.primordion.xholon.service.xholonhelper.ICutCopyPaste
Copy the node to the clipboard as an XML String.
copyToClipboard(IXholon) - Method in class org.primordion.xholon.service.XholonHelperService
 
cosCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
coshCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
cost - Variable in class org.primordion.dynsys.app.XhScheffranNActor
 
cost - Variable in class org.primordion.dynsys.app.XhScheffranTwoActor
 
cotCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
cothCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
couldUseDiffusion() - Method in class org.primordion.xholon.mech.petrinet.Transition
Could this transition use diffusion kinetics? // TODO should the in/out arcs have the same weight ?
countdown - Variable in class org.primordion.user.app.WolfSheepGrass.Grass
 
countObservers() - Method in interface org.primordion.xholon.base.IObservable
Returns the number of observers of this Observable object.
countObservers() - Method in class org.primordion.xholon.base.ObservableStateMachineEntity
 
countObservers() - Method in class org.primordion.xholon.base.ObservableXholonWithPorts
 
countOccupiedTerritories() - Method in class org.primordion.user.app.Risk.Player
Count the number of territories currently occupied by this player.
countReinforcementArmies() - Method in class org.primordion.user.app.Risk.Player
Count the number of reinforcement armies that this player will acquire at the start of the current turn.
countTokens() - Method in class org.primordion.xholon.util.StringTokenizer
Returns the number of tokens in the String.
CouplerCE - Static variable in interface org.primordion.dynsys.app.CeTrain
 
cp() - Method in class org.primordion.xholon.base.PatchOwner
Set all patch variables to their initial values.
CPCE - Static variable in interface org.primordion.xholon.common.mechanism.CeXBar
 
createChart(IXholon) - Method in class org.primordion.xholon.app.Application
 
createChart(IXholon) - Method in interface org.primordion.xholon.app.IApplication
Create a JFreeChart.
createChart(boolean) - Method in class org.primordion.xholon.io.AbstractChartViewer
 
createChart(boolean) - Method in interface org.primordion.xholon.io.IChartViewer
Create a chart from the captured data, and return the chart object without displaying it.
createGraph(IXholon, String, boolean) - Method in interface org.primordion.xholon.io.IGraphicalNetworkViewer
Create a graph using a tree layout.
createGraph(IXholon, String, boolean) - Method in interface org.primordion.xholon.io.IGraphicalTreeViewer
Create a graph using a tree layout.
createGridViewer(int) - Method in class org.primordion.xholon.app.Application
 
createGridViewer(int) - Method in interface org.primordion.xholon.app.IApplication
Create a grid viewer.
createHashEntry(IXholonClass) - Method in interface org.primordion.xholon.base.IInheritanceHierarchy
Create a hash entry for the specified IXholonClass.
createHashEntry(IXholonClass) - Method in class org.primordion.xholon.base.InheritanceHierarchy
 
createInteractions() - Method in class org.primordion.xholon.app.Application
 
createInteractions() - Method in interface org.primordion.xholon.app.IApplication
Enable the creation of interactions while the app is running.
CreateLinkActionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
CreateLinkObjectActionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
createNew(Object) - Method in class org.primordion.ef.other.Xholon2Xgmml
 
createNew(Object) - Method in class org.primordion.ef.Xholon2GraphML
 
createNew(Object) - Method in class org.primordion.xholon.io.csv.CsvStrWriter
 
createNew(Object) - Method in class org.primordion.xholon.io.htmlform.HtmlFormStrWriter
 
createNew(Object) - Method in class org.primordion.xholon.io.json.JsonStrWriter
 
createNew(Object) - Method in interface org.primordion.xholon.io.xml.IXmlReader
Create a new instance of an XML reader/parser, able to read from in.
createNew(Object) - Method in interface org.primordion.xholon.io.xml.IXmlWriter
Create a new instance of an XML writer, able to write to out.
createNew(Object) - Method in class org.primordion.xholon.io.xml.XmlGwtDomReader
 
createNew(Object) - Method in class org.primordion.xholon.io.xml.XmlReader
 
createNew(Object) - Method in class org.primordion.xholon.io.xml.XmlStrWriter
 
createNew(Object) - Method in class org.primordion.xholon.io.xml.XmlWriter
 
createNew(Object) - Method in class org.primordion.xholon.io.yaml.YamlStrWriter
 
createNewUserMechanism(String, String, String, int, int, IApplication) - Method in interface org.primordion.xholon.base.IMechanism
Create a new <UserMechanism/> node.
createNewUserMechanism(String, String, String, int, int, IApplication) - Method in class org.primordion.xholon.base.Mechanism
 
createNotes() - Method in class org.primordion.xholon.io.ChartViewerGnuplot
Create a notes file that can be used by a human to capture observations as the simulation is running.
createObject_UsingConstructor(Class, IXholon) - Method in interface org.primordion.xholon.base.IReflection
Create an object using a constructor.
createObject_UsingConstructor(Class, Object[], Class[]) - Method in interface org.primordion.xholon.base.IReflection
Create an object using a constructor.
createObject_UsingConstructor(Class, IXholon) - Method in class org.primordion.xholon.base.ReflectionJavaMicro
 
createObject_UsingConstructor(Class, Object[], Class[]) - Method in class org.primordion.xholon.base.ReflectionJavaMicro
 
CreateObjectActionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
createPort(IXholon, int, int[], String[], int[], String[], boolean) - Static method in class org.primordion.xholon.base.Port
Create an instance of the Port class.
createSequenceDiagram(String) - Method in interface org.primordion.xholon.base.IInteraction
Create a sequence diagram from the interaction.
createSequenceDiagram(String) - Method in class org.primordion.xholon.base.Interaction
 
createStateMachine() - Method in class org.primordion.user.app.Risk.ComputerPlayer
Create and start the actions state machine.
createStateMachine() - Method in class org.primordion.user.app.Risk.HumanPlayer
Create and start the actions state machine.
createTurtles(int) - Method in class org.primordion.xholon.base.PatchOwner
Create a given number of new turtles in the center of the grid.
createTurtles(int, String) - Method in class org.primordion.xholon.base.PatchOwner
Create a given number of new turtles in the center of the grid, of a given breed.
createXySeries(int, String[]) - Method in class org.primordion.xholon.io.ChartViewerC3
TODO fix this, or delete
createXySeries(int, String[]) - Method in class org.primordion.xholon.io.ChartViewerGnuplot
 
createXySeries(int, String[]) - Method in class org.primordion.xholon.io.ChartViewerGoogle2
TODO fix this, or delete
createXySeries(int, String[]) - Method in class org.primordion.xholon.io.ChartViewerNVD3
TODO fix this, or delete
createXySeries(int, String[]) - Method in interface org.primordion.xholon.io.IChartViewer
Create one or more xy data series.
CreatureCE - Static variable in interface org.primordion.user.app.Hex.CeHex
 
crt(int) - Method in class org.primordion.xholon.base.PatchOwner
Create a given number of new turtles in the center of the grid.
crt(int, String) - Method in class org.primordion.xholon.base.PatchOwner
Create a given number of new turtles in the center of the grid, of a given breed.
CS_INITIALIZED - Static variable in interface org.primordion.xholon.base.IControl
 
CS_LOADED - Static variable in interface org.primordion.xholon.base.IControl
 
CS_NO_MODEL_LOADED - Static variable in interface org.primordion.xholon.base.IControl
 
CS_PAUSED - Static variable in interface org.primordion.xholon.base.IControl
 
CS_RESETTING - Static variable in interface org.primordion.xholon.base.IControl
 
CS_RUNNING - Static variable in interface org.primordion.xholon.base.IControl
 
CS_STEPPING - Static variable in interface org.primordion.xholon.base.IControl
 
CS_STOPPED - Static variable in interface org.primordion.xholon.base.IControl
 
cscCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
cschCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
csh() - Method in interface org.primordion.ctrnn.AdapSysLab.Resources
 
csh() - Method in interface org.primordion.dynsys.app.leakybucket.Resources
 
csh() - Method in interface org.primordion.dynsys.app.stability.Resources
 
csh() - Method in interface org.primordion.user.app.azimuth.pn01.Resources
 
csh() - Method in interface org.primordion.user.app.Bestiary.Resources
 
csh() - Method in interface org.primordion.user.app.bigraph.roomsghosts.Resources
 
csh() - Method in interface org.primordion.user.app.climatechange.igm.Resources
 
csh() - Method in interface org.primordion.user.app.climatechange.mdcs.m2_1mp.Resources
 
csh() - Method in interface org.primordion.user.app.climatechange.mdcs.m2_2mp.Resources
 
csh() - Method in interface org.primordion.user.app.climatechange.solarsystemtest.Resources
 
csh() - Method in interface org.primordion.user.app.helloworldjnlp.Resources
 
csh() - Method in interface org.primordion.user.app.petrinet.feinberg1.Resources
 
csh() - Method in interface org.primordion.user.app.testNodePorts.Resources
 
csh() - Method in interface org.primordion.user.app.Turnstile.Resources
 
csh() - Method in interface org.primordion.xholon.app.Chameleon.Resources
 
csh() - Method in interface org.primordion.xholon.app.Furcifer.Resources
 
cshLargestObjects() - Method in interface org.primordion.user.app.solarsystem.Resources
 
cshSunEarth() - Method in interface org.primordion.user.app.solarsystem.Resources
 
cshSunPlanets() - Method in interface org.primordion.user.app.solarsystem.Resources
 
CsvStrWriter - Class in org.primordion.xholon.io.csv
A concrete class that knows how to write CSV through a Stax writer.
CsvStrWriter() - Constructor for class org.primordion.xholon.io.csv.CsvStrWriter
default constructor
CsvWriterFactory - Class in org.primordion.xholon.io.csv
This factory creates new instances of XmlWriter (CsvStaxWriter).
CsvWriterFactory() - Constructor for class org.primordion.xholon.io.csv.CsvWriterFactory
 
csymbolCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
ct() - Method in class org.primordion.xholon.base.PatchOwner
Kill all turtles within the scope of this PatchOwner.
CtfCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CtrnnCE - Static variable in interface org.primordion.ctrnn.AdapSysLab.CeAdapSysLab
 
CtrnnEntityCE - Static variable in interface org.primordion.ctrnn.AdapSysLab.CeAdapSysLab
 
curlCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
CutCopyPaste - Class in org.primordion.xholon.service.xholonhelper
Cut, copy, paste actions.
CutCopyPaste() - Constructor for class org.primordion.xholon.service.xholonhelper.CutCopyPaste
 
CutCopyPasteFactory - Class in org.primordion.xholon.service.xholonhelper
Factory that returns an object (ICutCopyPaste).
cutSelf(IXholon) - Method in class org.primordion.xholon.service.xholonhelper.CutCopyPaste
 
cutSelf(IXholon) - Method in interface org.primordion.xholon.service.xholonhelper.ICutCopyPaste
Do the actual work of cutting the node to an XML String.
cutSelf(IXholon) - Method in class org.primordion.xholon.service.XholonHelperService
 
cutToClipboard(IXholon) - Method in class org.primordion.xholon.service.xholonhelper.CutCopyPaste
 
cutToClipboard(IXholon) - Method in interface org.primordion.xholon.service.xholonhelper.ICutCopyPaste
Cut the node to the clipboard as an XML String.
cutToClipboard(IXholon) - Method in class org.primordion.xholon.service.XholonHelperService
 
CwasCCE - Static variable in interface org.primordion.user.app.SpatialGames.Ce09SpatialGames
 
CwasDCE - Static variable in interface org.primordion.user.app.SpatialGames.Ce09SpatialGames
 
Cymbal - Class in org.primordion.user.app.SpringIdol
Reimplementation of "Spring Idol" contest from: Walls, Craig.
Cymbal() - Constructor for class org.primordion.user.app.SpringIdol.Cymbal
 
CymbalCE - Static variable in interface org.primordion.user.app.SpringIdol.CeSpringIdol
 
CysCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CytCCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
CytCOxCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
CytCRedCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
CytoplasmCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CytoplasmCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
CytoplasmLocations - Class in org.primordion.cellontro.io.vrml
VRML CytoplasmLocations.
CytoplasmLocations() - Constructor for class org.primordion.cellontro.io.vrml.CytoplasmLocations
Constructor.
CytosineCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CytoSkeletonCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CytosolCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
CytosolCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
CytosolCE - Static variable in interface org.primordion.cellontro.app.sbml.CeGlycolysis
 

D

D_ACCE - Static variable in interface org.primordion.user.app.petrinet.feinberg1.Cefeinberg1
 
D_ALE_ACE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
D_BECE - Static variable in interface org.primordion.user.app.petrinet.feinberg1.Cefeinberg1
 
D_CE - Static variable in interface org.primordion.xholon.common.mechanism.CeXBar
 
D_DED_ECE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
D_DLE_SCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
Damoyselle - Class in org.primordion.user.app.SpringIdol
Reimplementation of "Spring Idol" contest from: Walls, Craig.
Damoyselle() - Constructor for class org.primordion.user.app.SpringIdol.Damoyselle
 
DamoyselleCE - Static variable in interface org.primordion.user.app.SpringIdol.CeSpringIdol
 
DAmpCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
Data - Class in org.primordion.xholon.service.gist
JavaScript overlay of a JSONP gist Data object.
DATA_URI_SCHEME - Static variable in interface org.primordion.xholon.service.svg.ISvgView
 
dataCE - Static variable in interface org.primordion.xholon.common.mechanism.CeScxmlEntity
 
datamodelCE - Static variable in interface org.primordion.xholon.common.mechanism.CeScxmlEntity
 
DataPlotterCE - Static variable in interface org.primordion.xholon.common.viewer.CeDataPlotter
 
DataStoreNodeCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActivityEntity
 
DayOfWeekModeDisplayCE - Static variable in interface org.primordion.user.xmiapps.Watch.CeWatch
 
DCE - Static variable in interface org.primordion.cellontro.app.sbml.CeBrusselator
 
dCE - Static variable in interface org.primordion.memcomp.app.CoopPSys00ex0.CeCoopPSys00ex0
 
dCE - Static variable in interface org.primordion.memcomp.app.CoopSys02ex343_1.CeCoopSys02ex343_1
 
dCE - Static variable in interface org.primordion.memcomp.app.CoopSys02ex343_2.CeCoopSys02ex343_2
 
dCE - Static variable in interface org.primordion.memcomp.app.Fsm06ex1.CeFsm06ex1
 
dCE - Static variable in interface org.primordion.memcomp.app.SymAnti02ex41.CeSymAnti02ex41
 
DCE - Static variable in interface org.primordion.user.app.petrinet.feinberg1.Cefeinberg1
 
DCE - Static variable in interface org.primordion.xholon.common.mechanism.CeXBar
 
DCmpCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
Death - Class in org.primordion.user.app.climatechange.carboncycle03
 
Death() - Constructor for class org.primordion.user.app.climatechange.carboncycle03.Death
 
debug(Object) - Method in class org.primordion.xholon.logging.Log
 
debug(Object, Throwable) - Method in class org.primordion.xholon.logging.Log
 
debugM - Static variable in class org.primordion.xholon.base.Msg
 
Decay - Class in org.primordion.user.app.climatechange.carboncycle03
 
Decay() - Constructor for class org.primordion.user.app.climatechange.carboncycle03.Decay
 
DecisionNodeCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActivityEntity
 
declareCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
Decoration - Class in org.primordion.xholon.base
A set of extra optional attributes that can decorate a Mechanism, XholonClass, or Xholon.
Decoration() - Constructor for class org.primordion.xholon.base.Decoration
 
decPheneVal(double) - Method in class org.primordion.cellontro.app.sbml.XhAbstractSbml
 
decPheneVal(double) - Method in class org.primordion.cellontro.app.XhCell
 
decPheneVal(double) - Method in class org.primordion.cellontro.app.XhCellAutop
 
decPheneVal(double) - Method in class org.primordion.cellontro.app.XhLife
 
decPheneVal(double) - Method in interface org.primordion.cellontro.base.IBioXholon
Decrement the phene value by incAmount.
decQuantityArmies(int) - Method in class org.primordion.user.app.Risk.Territory
Decrement the quantity of armies on this territory.
decUnplacedArmies(int) - Method in class org.primordion.user.app.Risk.Player
 
decVal(double) - Method in class org.primordion.ealontro.app.CartCentering.XhCartCentering
 
decVal(double) - Method in class org.primordion.ealontro.app.EcjAntTrail.XhAntTrail
 
decVal(double) - Method in class org.primordion.ealontro.app.EcjTutorial4.XhTutorial4
 
decVal(double) - Method in class org.primordion.user.app.climatechange.carboncycle03.Xhcarboncycle03
 
decVal(double) - Method in class org.primordion.user.app.rcs.Rcs1.XhRcs1
 
decVal(double) - Method in class org.primordion.user.app.Red.XhRed
 
decVal(double) - Method in class org.primordion.user.xmiapps.__XholonTemplate__.Xh__XholonTemplate__
 
decVal(double) - Method in class org.primordion.user.xmiapps.beard41.XhBeard2005_UML_Xholon_Step4_v1
 
decVal(double) - Method in class org.primordion.user.xmiapps.Rcs_GP_FSM.XhRcs_GP_FSM
 
decVal(int) - Method in class org.primordion.user.xmiapps.Rcs_GP_FSM_Grid.XhRcs_GP_FSM_Grid
 
decVal(double) - Method in class org.primordion.xholon.app.Chameleon.XhChameleon
 
decVal(double) - Method in class org.primordion.xholon.app.Furcifer.FurciferAll
 
decVal(double) - Method in class org.primordion.xholon.base.Attribute.Attribute_double
 
decVal(double) - Method in class org.primordion.xholon.base.Attribute.Attribute_float
 
decVal(int) - Method in class org.primordion.xholon.base.Attribute.Attribute_int
 
decVal(int) - Method in class org.primordion.xholon.base.Attribute.Attribute_long
 
decVal(int) - Method in class org.primordion.xholon.base.Attribute.Attribute_short
 
decVal(double) - Method in interface org.primordion.xholon.base.IXholon
Decrement an internal double value by a specified amount.
decVal(int) - Method in interface org.primordion.xholon.base.IXholon
Decrement an internal int value by a specified amount.
decVal(double) - Method in class org.primordion.xholon.base.Xholon
 
decVal(int) - Method in class org.primordion.xholon.base.Xholon
 
decVal(double) - Method in class org.primordion.xholon.mech.petrinet.Place
 
decVal(double) - Method in class org.primordion.xholon.mech.petrinet.Transition
 
decVal(double) - Method in class org.primordion.xholon.service.mathscieng.Quantity
 
decVal(double) - Method in class org.primordion.xholon.service.mathscieng.QuantityScalar
 
decVal(double) - Method in class org.primordion.xholon.util.XholonTreeNode
 
decVal(int) - Method in class org.primordion.xholon.util.XholonTreeNode
 
default_csh() - Method in interface org.primordion.user.app.climatechange.igm.Resources
 
DEFAULT_LEVEL - Static variable in class org.primordion.xholon.util.XholonTreeNode
 
DEFAULT_NAMESPACE - Static variable in interface org.primordion.xholon.base.IMechanism
The default namespace.
DEFAULT_NS_PREFIX - Static variable in class org.primordion.xholon.io.xml.XMLConstants
 
DEFAULT_SIZE_MSG_Q - Static variable in interface org.primordion.xholon.base.IXholon
The default maximum size of the application message Q.
DEFAULT_SIZE_SYSTEM_MSG_Q - Static variable in interface org.primordion.xholon.base.IXholon
The default maximum size of the system message Q.
DEFAULT_SPRING_PATHNAME - Static variable in class org.primordion.ef.other.Xholon2Spring
Default pathname for Spring .xml files.
default_xhn() - Method in interface org.primordion.user.app.helloworldjnlp.Resources
 
DefaultBoundedRangeModelCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
DefaultButtonModelCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
DefaultCellEditorCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
DefaultComboBoxModelCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
DefaultListModelCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
DefaultListSelectionModelCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
DefaultMutableTreeNodeCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
DefaultSingleSelectionModelCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
DefaultStyledDocumentCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
DefaultTableColumnModelCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
DefaultTableModelCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
DefaultTreeCellRendererCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
DefaultTreeModelCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
DefaultTreeSelectionModelCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
DefaultXholonService - Class in org.primordion.xholon.service
This is a very simple concrete extension of AbstractXolonService.
DefaultXholonService() - Constructor for class org.primordion.xholon.service.DefaultXholonService
 
DeferrableTriggerCE - Static variable in interface org.primordion.xholon.common.mechanism.CeStateMachineEntity
 
DegCE - Static variable in interface org.primordion.xholon.common.mechanism.CeXBar
 
degreeCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
DehydrogenaseFluxCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
deleteObserver(IXholon) - Method in interface org.primordion.xholon.base.IObservable
Deletes an observer from the set of observers of this object.
deleteObserver(IXholon) - Method in class org.primordion.xholon.base.ObservableStateMachineEntity
 
deleteObserver(IXholon) - Method in class org.primordion.xholon.base.ObservableXholonWithPorts
 
deleteObservers() - Method in interface org.primordion.xholon.base.IObservable
Clears the observer list so that this object no longer has any observers.
deleteObservers() - Method in class org.primordion.xholon.base.ObservableStateMachineEntity
 
deleteObservers() - Method in class org.primordion.xholon.base.ObservableXholonWithPorts
 
DELTA_T - Static variable in class org.primordion.ctrnn.AdapSysLab.XhAbstractCtrnn
 
DendriteBilayerCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
DendriteCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
DendriteMembraneCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
DendritesCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
DeoxyriboseCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
DependentVariableCE - Static variable in interface org.primordion.dynsys.app.CeFibonacci
 
DepositCoinEventCE - Static variable in interface org.primordion.user.app.Turnstile.CeTurnstile
 
depth() - Method in interface org.primordion.xholon.base.IXholon
Get the number of ancestors of this node, excluding this node itself.
depth() - Method in class org.primordion.xholon.base.Xholon
 
depth() - Method in class org.primordion.xholon.util.XholonTreeNode
 
dequeue() - Method in interface org.primordion.xholon.base.IQueue
Take an object off the queue.
dequeue() - Method in class org.primordion.xholon.base.Queue
 
dequeue() - Method in class org.primordion.xholon.base.QueueSynchronized
 
des_AVAILABLE - Static variable in class org.primordion.user.xmiapps.Elevator.XhElevator
 
des_BEING_SERVICED - Static variable in class org.primordion.user.xmiapps.Elevator.XhElevator
 
des_REQUESTED - Static variable in class org.primordion.user.xmiapps.Elevator.XhElevator
 
DesktopIconUICE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
DesktopPaneUICE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
DestroyLinkActionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
DestroyObjectActionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
determinantCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
DfdContainerCE - Static variable in interface org.primordion.xholon.common.mechanism.CeDfdEntity
 
DfdDataFlowCE - Static variable in interface org.primordion.xholon.common.mechanism.CeDfdEntity
 
DfdDataFlowsCE - Static variable in interface org.primordion.xholon.common.mechanism.CeDfdEntity
 
DfdDataStoreCE - Static variable in interface org.primordion.xholon.common.mechanism.CeDfdEntity
 
DfdDataStoresCE - Static variable in interface org.primordion.xholon.common.mechanism.CeDfdEntity
 
DfdEntityCE - Static variable in interface org.primordion.xholon.common.mechanism.CeDfdEntity
 
DfdExternalEntitiesCE - Static variable in interface org.primordion.xholon.common.mechanism.CeDfdEntity
 
DfdExternalEntityCE - Static variable in interface org.primordion.xholon.common.mechanism.CeDfdEntity
 
DfdProcessCE - Static variable in interface org.primordion.xholon.common.mechanism.CeDfdEntity
 
DfdProcessesCE - Static variable in interface org.primordion.xholon.common.mechanism.CeDfdEntity
 
DGmpCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
DHAPCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
DialogCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
Dice - Class in org.primordion.user.app.Risk
Dice is a container for a set of Die objects.
Dice() - Constructor for class org.primordion.user.app.Risk.Dice
 
Die - Class in org.primordion.user.app.Risk
Players roll a set of Die objects to determine the outcomes of attacks.
Die() - Constructor for class org.primordion.user.app.Risk.Die
 
die() - Method in interface org.primordion.xholon.base.ITurtle
Remove yourself permanently from the gene pool.
die() - Method in class org.primordion.xholon.base.Turtle
 
DiencephalonCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
diffCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
diffuse(String, double) - Method in class org.primordion.xholon.base.PatchOwner
Asks each patch to share the current value of a specified variable with all of its neighbors.
diffuse4(String, double) - Method in class org.primordion.xholon.base.PatchOwner
Asks each patch to share the current value of a specified variable with all of its neighbors.
DigestedFoodCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
DigestiveSystemCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
DihydroxyacetonePhosphateCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
DihydroxyacetonePhosphateCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
DihydroxyacetonePhosphateCE - Static variable in interface org.primordion.cellontro.app.sbml.CeGlycolysis
 
direction - Static variable in class org.primordion.ealontro.app.EcjAntTrail.XhAntTrail
 
directionName - Static variable in class org.primordion.ealontro.app.EcjAntTrail.XhAntTrail
 
discardCard(IXholon) - Method in class org.primordion.user.app.Risk.Cards
Place a used card on the discard pile.
DispatcherCE - Static variable in interface org.primordion.user.xmiapps.Elevator.CeElevator
 
DisplacedBugCE - Static variable in interface org.primordion.user.app.StupidModel.sm5tg.CeStupidModel5tg
 
DisplayCE - Static variable in interface org.primordion.user.xmiapps.Watch.CeWatch
 
displayVizjs() - Method in class org.primordion.ef.Xholon2Graphviz
Display the Graphviz content as SVG or other output format, using viz.js .
DissolvedOrgCarbToOcean - Class in org.primordion.user.app.climatechange.carboncycle03
 
DissolvedOrgCarbToOcean() - Constructor for class org.primordion.user.app.climatechange.carboncycle03.DissolvedOrgCarbToOcean
 
distance(IXholon) - Method in interface org.primordion.xholon.base.IPatch
Return the distance between self and the specified turtle or patch.
distance(IXholon) - Method in interface org.primordion.xholon.base.ITurtle
Return the distance between self and the specified turtle or patch.
distance(IXholon) - Method in class org.primordion.xholon.base.Patch
 
distance(IXholon) - Method in class org.primordion.xholon.base.Turtle
 
distancexy(double, double) - Method in interface org.primordion.xholon.base.IPatch
Return the distance between yourself and the specified x, y coordinates.
distancexy(double, double) - Method in interface org.primordion.xholon.base.ITurtle
Return the distance between yourself and the specified x, y coordinates.
distancexy(double, double) - Method in class org.primordion.xholon.base.Patch
 
distancexy(double, double) - Method in class org.primordion.xholon.base.Turtle
 
divergenceCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
Divide - Class in org.primordion.xholon.mech.mathml.content
MathML 2.0 - divide Divide is a binary operator.
Divide() - Constructor for class org.primordion.xholon.mech.mathml.content.Divide
 
divideCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
DnaCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
DnaNucleotideCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
DnaTest1CE - Static variable in interface org.primordion.cellontro.app.CeLife
 
doAction(String) - Method in class org.primordion.user.app.Bestiary.Beast
 
doAction(String) - Method in class org.primordion.user.app.Bestiary.Door
 
doAction(String) - Method in class org.primordion.user.app.Bestiary.HabitatCellBestiary
 
doAction(String) - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.Fluxes
 
doAction(String) - Method in class org.primordion.user.app.English2French.Lexicon
 
doAction(String) - Method in class org.primordion.user.app.English2French.rule.Rule_C_FEM_A
 
doAction(String) - Method in class org.primordion.user.app.English2French.rule.Rule_G_CIL
 
doAction(String) - Method in class org.primordion.user.app.English2French.Transforms
 
doAction(String) - Method in class org.primordion.user.app.Risk.Player
 
doAction(String) - Method in class org.primordion.xholon.base.Behavior_gwtjs
 
doAction(String) - Method in interface org.primordion.xholon.base.IXholon
Do a specific action that this xholon knows how to do.
doAction(String) - Method in class org.primordion.xholon.base.Queue
 
doAction(String) - Method in class org.primordion.xholon.base.QueueSynchronized
 
doAction(String) - Method in class org.primordion.xholon.base.Xholon
 
doAction(String) - Method in class org.primordion.xholon.io.Specials
 
doAction(String) - Method in class org.primordion.xholon.mech.petrinet.AnalysisPetriNet
 
doAction(String) - Method in class org.primordion.xholon.mech.petrinet.cat.AnalysisCat
 
doAction(String) - Method in class org.primordion.xholon.mech.petrinet.crn.AnalysisCRN
 
doAction(String) - Method in class org.primordion.xholon.mech.petrinet.grid.GridOwner
 
doAction(String) - Method in class org.primordion.xholon.mech.petrinet.memcomp.AnalysisMemComp
 
doAction(String) - Method in class org.primordion.xholon.service.NodeSelectionService
 
doAction(String) - Method in class org.primordion.xholon.service.nosql.Neo4jRestApi
 
doAction(String) - Method in class org.primordion.xholon.service.RecordPlaybackService
 
doAction(String) - Method in class org.primordion.xholon.service.SearchEngineService
 
doAction(String) - Method in class org.primordion.xholon.service.ServiceLocatorService
 
doAction(String) - Method in class org.primordion.xholon.service.svg.SvgViewBrowser
 
doAction(String) - Method in class org.primordion.xholon.service.WiringService
 
doAction(String) - Method in class org.primordion.xholon.service.XholonDirectoryService
 
doAction(String) - Method in class org.primordion.xholon.service.XPathService
 
DoActivityCE - Static variable in interface org.primordion.xholon.common.mechanism.CeStateMachineEntity
 
DOCDECL - Static variable in interface org.primordion.xholon.io.xml.IXmlReader
DOCDECL event type.
DocRequester - Class in org.primordion.ef.xholon
Request an app-specific document, typically a config .xml file.
DocRequester() - Constructor for class org.primordion.ef.xholon.DocRequester
 
DocumentCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
doFlagPass() - Method in class org.primordion.user.app.English2French.FlagPass
Do flag pass.
domainCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
domainofapplicationCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
Door - Class in org.primordion.user.app.Bestiary
Door
Door() - Constructor for class org.primordion.user.app.Bestiary.Door
 
DoorCE - Static variable in interface org.primordion.user.app.Bestiary.CeBestiary
 
DoorCE - Static variable in interface org.primordion.user.xmiapps.Elevator.CeElevator
 
DoorControl3 - Static variable in class org.primordion.user.xmiapps.Elevator.XhElevator
 
DoorControlButtonCE - Static variable in interface org.primordion.user.xmiapps.Elevator.CeElevator
 
DoorHoistControl4 - Static variable in class org.primordion.user.xmiapps.Elevator.XhElevator
 
doReset() - Method in class org.fr.lri.swingstates.sm.StateMachine
Method called when this state machine is reset.
doResume() - Method in class org.fr.lri.swingstates.sm.StateMachine
Method called when this state machine is resumed.
DorsalHornLeftCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
DorsalHornRightCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
DorsalRootGanglionCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_A_FPL
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_B_CET_A
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_B_LEL_A
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_B_POS_A
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_B_UNE_A
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_C_CEL_A
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_C_FEM_A
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_C_FPL
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_C_JEV_H
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_C_PLU
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_C_POS_B
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_D_ALE_A
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_D_DLE_S
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_Flag
Do the rule associated with this flag.
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_G_CIL
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_J_AND_A
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_N_PAS_A
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_Q_QUI_R
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_T_AFT_A
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_T_PRO_N
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_V_IMP_A
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_V_QUE
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_X_QQQ_Q
 
doRule() - Method in class org.primordion.user.app.English2French.rule.Rule_X_XXX_X
 
doRule(IXholon) - Method in class org.primordion.user.app.English2French.WordRule
Do a word rule.
doStateMachine(IMessage) - Method in interface org.primordion.xholon.base.IStateMachineEntity
Execute an instance of a state machine.
doStateMachine(IMessage) - Method in class org.primordion.xholon.base.StateMachineEntity
 
doSuspend() - Method in class org.fr.lri.swingstates.sm.StateMachine
Method called when this state machine is suspended.
doubleValue(Unit) - Method in class org.primordion.xholon.service.mathscieng.Amount
 
doubleValue() - Method in class org.primordion.xholon.service.mathscieng.Amount
 
downhill() - Method in interface org.primordion.xholon.base.ITurtle
"Return the turtle heading in the direction of the minimum value of the variable patch-variable, of the patches in a one-patch radius of the turtle."
downhill() - Method in class org.primordion.xholon.base.Turtle
 
downhill4() - Method in interface org.primordion.xholon.base.ITurtle
"Return the turtle heading in the direction of the minimum value of the variable patch-variable, of the patches in a one-patch radius of the turtle."
downhill4() - Method in class org.primordion.xholon.base.Turtle
 
DownLw - Class in org.primordion.user.app.climatechange.igm
 
DownLw() - Constructor for class org.primordion.user.app.climatechange.igm.DownLw
 
Downwelling - Class in org.primordion.user.app.climatechange.carboncycle03
 
Downwelling() - Constructor for class org.primordion.user.app.climatechange.carboncycle03.Downwelling
 
doWordPass() - Method in class org.primordion.user.app.English2French.WordPass
Do word pass.
doXQuery(IXholon, String, int, boolean, boolean) - Method in class org.primordion.xholon.service.XholonHelperService
Do an XQuery operation.
dPCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCircadianClock
 
DPCE - Static variable in interface org.primordion.xholon.common.mechanism.CeXBar
 
draw(IXholon) - Method in class org.primordion.xholon.io.TreeViewerText
Draw a 2D representation of the tree, using inorder traversal.
drawTimeline() - Method in interface org.primordion.xholon.service.timeline.ITimelineViewer
 
drawTimeline() - Method in class org.primordion.xholon.service.timeline.TimelineViewerChapJSON
 
Drill - Class in org.primordion.user.app.English2French
 
Drill() - Constructor for class org.primordion.user.app.English2French.Drill
 
Drill_Eng2FrCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
Drill_Fr2EngCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
DrillCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
drip(IXholon, IXholon) - Method in class org.primordion.memcomp.base.XhAbstractBraneCalc
Drip - Split off zero inner membranes.
DripCE - Static variable in interface org.primordion.memcomp.app.BraneCalc1.CeBraneCalc1
 
dropSize - Variable in class org.primordion.ealontro.app.AntForaging.XhAntForaging
 
dTCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCircadianClock
 
DTmpCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
DummyService - Class in org.primordion.xholon.service
A dummy service for testing.
DummyService() - Constructor for class org.primordion.xholon.service.DummyService
 
DummyServiceCE - Static variable in interface org.primordion.xholon.common.mechanism.CeXholonService
 
DurationObservationActionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
DwasCCE - Static variable in interface org.primordion.user.app.SpatialGames.Ce09SpatialGames
 
DwasDCE - Static variable in interface org.primordion.user.app.SpatialGames.Ce09SpatialGames
 
dx() - Method in interface org.primordion.xholon.base.ITurtle
Returns the delta in the x direction if the turtle moved one unit along its current heading.
dx() - Method in class org.primordion.xholon.base.Turtle
 
dy() - Method in interface org.primordion.xholon.base.ITurtle
Returns the delta in the y direction if the turtle moved one unit along its current heading.
dy() - Method in class org.primordion.xholon.base.Turtle
 

E

Earth - Class in org.primordion.user.app.climatechange.model04
Earth
Earth() - Constructor for class org.primordion.user.app.climatechange.model04.Earth
 
EarthCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
EarthCE - Static variable in interface org.primordion.dynsys.app.CeGravity1
 
EarthCE - Static variable in interface org.primordion.user.app.climatechange.model04.Cemodel04
 
earthRB_csh() - Method in interface org.primordion.user.app.climatechange.mdcs.m2_2mp.Resources
 
ECE - Static variable in interface org.primordion.cellontro.app.sbml.CeBrusselator
 
eCE - Static variable in interface org.primordion.memcomp.app.CoopSys02ex343_1.CeCoopSys02ex343_1
 
eCE - Static variable in interface org.primordion.memcomp.app.Fsm06ex1.CeFsm06ex1
 
eCE - Static variable in interface org.primordion.memcomp.app.SymAnti02ex41.CeSymAnti02ex41
 
ECE - Static variable in interface org.primordion.user.app.petrinet.feinberg1.Cefeinberg1
 
EcjAntTrailSystemCE - Static variable in interface org.primordion.ealontro.app.EcjAntTrail.CeAntTrail
 
EcjTutorial4SystemCE - Static variable in interface org.primordion.ealontro.app.EcjTutorial4.CeTutorial4
 
edit(String, IApplication) - Method in class org.client.JavaApp2Workbook
Optionally save the app to the browser's localStorage, and invoke the workbook editor which will read it from localStorage.
EfferentCentralNeuronCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
EfParamsGenerator - Class in org.primordion.xholon.script
Generate GWT JSNI code for use in an external format writer.
EfParamsGenerator() - Constructor for class org.primordion.xholon.script.EfParamsGenerator
 
elementaryfunctionsCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
ElevatorCE - Static variable in interface org.primordion.user.xmiapps.Elevator.CeElevator
 
ElevatorDispatch2 - Static variable in class org.primordion.user.xmiapps.Elevator.XhElevator
 
ElevatorDispatch3 - Static variable in class org.primordion.user.xmiapps.Elevator.XhElevator
 
ElevatorPanelCE - Static variable in interface org.primordion.user.xmiapps.Elevator.CeElevator
 
EllipseCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
elseCE - Static variable in interface org.primordion.xholon.common.mechanism.CeScxmlEntity
 
elseifCE - Static variable in interface org.primordion.xholon.common.mechanism.CeScxmlEntity
 
EmittedByAtmosphereVCE - Static variable in interface org.primordion.user.app.climatechange.model04.Cemodel04
 
EmittedByCloudsVCE - Static variable in interface org.primordion.user.app.climatechange.model04.Cemodel04
 
empty() - Method in interface org.primordion.xholon.base.IQueue
Empty the Queue, and discard its contents.
empty() - Method in class org.primordion.xholon.base.Queue
 
empty() - Method in class org.primordion.xholon.base.QueueSynchronized
 
EmptyBorderCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
emptysetCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
enableDisableAction(String, boolean) - Method in class org.primordion.user.app.Risk.Player
Enable or disable a specified action.
enableDisableAllActions(boolean) - Method in class org.primordion.user.app.Risk.Player
Enable or disable all actions.
enableStandardActions() - Method in class org.primordion.user.app.Risk.Player
Enable standard actions that are available in any state.
EnclosedSpaceCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
END_DOCUMENT - Static variable in interface org.primordion.xholon.io.xml.IXmlReader
End document event.
END_TAG - Static variable in interface org.primordion.xholon.io.xml.IXmlReader
End tag event type.
EndoplasmicReticulumCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
EndosomeBilayerCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
EndosomeCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
EndosomeFluidCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
EndosomeMembraneCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
EndosomeSpaceCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
energy - Variable in class org.primordion.user.app.WolfSheepGrass.WolfSheep
 
EnergyBudgetSvgLabels_en() - Method in interface org.primordion.user.app.climatechange.mdcs.m2_2mp.Resources
 
EngineCE - Static variable in interface org.primordion.dynsys.app.CeTrain
 
ENOCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
EnolaseCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
EnolaseCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
enqueue(Object) - Method in interface org.primordion.xholon.base.IQueue
Add an object to the queue.
enqueue(Object) - Method in class org.primordion.xholon.base.Queue
 
enqueue(Object) - Method in class org.primordion.xholon.base.QueueSynchronized
 
enter() - Method in class org.fr.lri.swingstates.sm.State
The method called when the parent state machine enters this state.
ENTITY_REF - Static variable in interface org.primordion.xholon.io.xml.IXmlReader
ENTITY_REF event type.
EntranceCE - Static variable in interface org.primordion.user.app.Bestiary.CeBestiary
 
EntryActivityCE - Static variable in interface org.primordion.xholon.common.mechanism.CeStateMachineEntity
 
entrySet() - Method in class org.primordion.xholon.base.XholonMap
 
EnvironmentCE - Static variable in interface org.primordion.memcomp.app.CoopPSys00ex0.CeCoopPSys00ex0
 
EnvironmentCE - Static variable in interface org.primordion.memcomp.app.CoopSys02ex32_1.CeCoopSys02ex32_1
 
EnvironmentCE - Static variable in interface org.primordion.memcomp.app.CoopSys02ex343_1.CeCoopSys02ex343_1
 
EnvironmentCE - Static variable in interface org.primordion.memcomp.app.CoopSys02ex343_2.CeCoopSys02ex343_2
 
EnvironmentCE - Static variable in interface org.primordion.memcomp.app.Fsm06ex1.CeFsm06ex1
 
EnvironmentCE - Static variable in interface org.primordion.memcomp.app.SymAnti02ex41.CeSymAnti02ex41
 
EnzymeCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
EnzymeCE - Static variable in interface org.primordion.user.app.rcs.Rcs1.CeRcs1
 
EnzymeCE - Static variable in interface org.primordion.user.app.rcs.Rcs2.CeRcs2
 
EnzymeCE - Static variable in interface org.primordion.user.xmiapps.Rcs_GP_FSM.CeRcs_GP_FSM
 
EnzymeCE - Static variable in interface org.primordion.user.xmiapps.Rcs_GP_FSM_Grid.CeRcs_GP_FSM_Grid
 
EnzymeCE - Static variable in interface org.primordion.user.xmiapps.Rcs_GP_MM.CeRcs_GP_MM
 
EnzymeCE - Static variable in interface org.primordion.user.xmiapps.Rcs_GP_MM_NoSymbols.CeRcs_GP_MM_NoSymbols
 
EOF - Static variable in interface org.primordion.xholon.base.IInheritanceHierarchy
 
Eq - Class in org.primordion.xholon.mech.mathml.content
MathML 2.0 - eq
Eq() - Constructor for class org.primordion.xholon.mech.mathml.content.Eq
 
eqCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
equals(Object) - Method in class org.primordion.xholon.base.transferobject.MessageSenderReceiver
 
equals(Object) - Method in class org.primordion.xholon.base.Xholon
Two xholons are equal only if they are the same object.
equals(Object) - Method in class org.primordion.xholon.io.xml.namespace.QName
 
equivalentCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
ErBilayerCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
ErFluidCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
ErMembraneCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
error(Object) - Method in class org.primordion.xholon.logging.Log
 
error(Object, Throwable) - Method in class org.primordion.xholon.logging.Log
 
errorM - Static variable in class org.primordion.xholon.base.Msg
 
ErythrocyteCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
EsophagusCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
EstradiolCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
EstrogenCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
EtchedBorderCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
EthanolamineCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
EtOHCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
EubacteriaCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
EukaryoteCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
EukaryoticCellCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
EukaryoticCellCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
EukaryoticCellCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
eulergammaCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
evaluate(String, Object) - Method in class org.primordion.xholon.base.AbstractXPath
 
evaluate(String, Object, int) - Method in class org.primordion.xholon.base.AbstractXPath
 
evaluate(String, IXholon) - Method in class org.primordion.xholon.base.AbstractXPath
 
evaluate(String, Object, int) - Method in interface org.primordion.xholon.base.IXPath
Evaluate an XPath expression in the specified context and return the result as the specified type.
evaluate(String, Object) - Method in interface org.primordion.xholon.base.IXPath
Evaluate an XPath expression in the specified context and return the result as a String.
evaluate(String, IXholon) - Method in interface org.primordion.xholon.base.IXPath
Evaluate an XPath expression in the specified context and return the result as a IXholon.
evaluate(String, IXholon, List<IXholon>) - Method in interface org.primordion.xholon.base.IXPath
Evaluate an XPath expression in the specified context and return the result as a IXholon.
evaluate(String, Object, int) - Method in class org.primordion.xholon.base.PcsPath
 
evaluate(String, Object) - Method in class org.primordion.xholon.base.PcsPath
 
evaluate(String, IXholon) - Method in class org.primordion.xholon.base.PcsPath
 
evaluate(String, IXholon, List) - Method in class org.primordion.xholon.base.PcsPath
 
evaluate(String, IXholon, List<IXholon>) - Method in class org.primordion.xholon.base.XPath
TODO - An instance of XPath could have a problem if it's running on thread A, is interrupted by thread B, and then continues on thread A, if the processing on thread B modifies the structure of the tree.
Event - Class in org.fr.lri.swingstates.sm.transitions
A transition triggered in a high-level event.
Event(String, String) - Constructor for class org.fr.lri.swingstates.sm.transitions.Event
Builds a transition with no modifier.
Event(String) - Constructor for class org.fr.lri.swingstates.sm.transitions.Event
Builds a transition on a position with no modifier that loops on current state.
Event(Class, String) - Constructor for class org.fr.lri.swingstates.sm.transitions.Event
Builds a transition with no modifier that is triggered by any virtual events whose type is a subclass of eventClass.
Event(Class) - Constructor for class org.fr.lri.swingstates.sm.transitions.Event
Builds a transition with no modifier that is triggered by any virtual events whose type is a subclass of eventClass.
EventCE - Static variable in interface org.primordion.user.app.Turnstile.CeTurnstile
 
eventOccured(EventObject) - Method in class org.fr.lri.swingstates.sm.StateMachine
EventsCE - Static variable in interface org.primordion.user.app.Turnstile.CeTurnstile
 
execModel(String, IApplication) - Method in class org.primordion.xholon.io.AbstractXholonGui
Execute a model.
execModel(String, IApplication) - Method in interface org.primordion.xholon.io.IXholonGui
 
ExecutableNodeCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActivityEntity
 
exists(String) - Method in class org.primordion.xholon.io.cherrytree.CherryTreeWriterFactory
Do the Writer classes exist?
exists(String) - Method in class org.primordion.xholon.io.csv.CsvWriterFactory
Do the Writer classes exist?
exists(String) - Method in class org.primordion.xholon.io.htmlform.HtmlFormWriterFactory
Do the Writer classes exist?
exists(String) - Method in class org.primordion.xholon.io.json.JsonWriterFactory
Do the Reader classes exist?
exists() - Method in class org.primordion.xholon.io.XholonWorkbookBundle
Does this instance of XholonWorkbookBundle contain a XholonWorkbook.
exists(String) - Method in class org.primordion.xholon.io.xml.XmlWriterFactory
Do the Reader classes (XPP or StAX) exist?
exists(String) - Method in class org.primordion.xholon.io.yaml.YamlWriterFactory
Do the Writer classes exist?
existsCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
ExitActivityCE - Static variable in interface org.primordion.xholon.common.mechanism.CeStateMachineEntity
 
exo(IXholon, IXholon) - Method in class org.primordion.memcomp.base.XhAbstractBraneCalc
Exo - Exocytosis
ExoCE - Static variable in interface org.primordion.memcomp.app.BraneCalc1.CeBraneCalc1
 
ExpansionNodeCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActivityEntity
 
ExpansionRegionCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActionEntity
 
expCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
ExpectedResultCE - Static variable in interface org.primordion.ealontro.app.EcjTutorial4.CeTutorial4
 
exponentialeCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
exportIXholonApi(IXholon) - Static method in class org.client.XholonJsApi
For now, I'm storing the various API function objects in the single Application object.
exportTopLevelApi(IApplication) - Static method in class org.client.XholonJsApi
Export a top-level static API that can be used by external JavaScript.
ExternalFormatService - Class in org.primordion.xholon.service
External Format Service.
ExternalFormatService() - Constructor for class org.primordion.xholon.service.ExternalFormatService
 
ExternalFormatServiceGenerator - Class in org.server
Generate a new ExternalFormatService subclass with app-specific methods.
ExternalFormatServiceGenerator() - Constructor for class org.server.ExternalFormatServiceGenerator
 
ExternalSpaceCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
ExtraCellularSolutionCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
ExtraCellularSolutionCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
ExtraCellularSolutionCE - Static variable in interface org.primordion.user.xmiapps.beard41.CeBeard2005_UML_Xholon_Step4_v1
 
ExtraCellularSpaceCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
ExtraCellularSpaceCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
EyeCE - Static variable in interface org.primordion.cellontro.app.CeLife
 

F

f - Variable in class org.primordion.dynsys.app.XhScheffranNActor
 
f1 - Variable in class org.primordion.dynsys.app.XhScheffranTwoActor
 
F16bPCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
f2 - Variable in class org.primordion.dynsys.app.XhScheffranTwoActor
 
F26bPCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
F6PCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
face(IXholon) - Method in interface org.primordion.xholon.base.ITurtle
Turn to face the specified turtle or patch.
face(IXholon) - Method in class org.primordion.xholon.base.Turtle
 
facexy(double, double) - Method in interface org.primordion.xholon.base.ITurtle
Turn to face the specified x, y coordinates.
facexy(double, double) - Method in class org.primordion.xholon.base.Turtle
 
Factorial - Class in org.primordion.xholon.mech.mathml.content
MathML 2.0 - factorial
Factorial() - Constructor for class org.primordion.xholon.mech.mathml.content.Factorial
 
factorialCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
factorofCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
FAIL - Static variable in class org.primordion.user.xmiapps.TestFsmOrthogonal.XhTestFsmOrthogonal
 
falseCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
fatal(Object) - Method in class org.primordion.xholon.logging.Log
 
fatal(Object, Throwable) - Method in class org.primordion.xholon.logging.Log
 
fCE - Static variable in interface org.primordion.memcomp.app.CoopSys02ex343_1.CeCoopSys02ex343_1
 
fCE - Static variable in interface org.primordion.memcomp.app.SymAnti02ex41.CeSymAnti02ex41
 
fd(double) - Method in interface org.primordion.xholon.base.ITurtle
Move forward a given distance.
fd(double) - Method in class org.primordion.xholon.base.Turtle
 
FEATURE_SECURE_PROCESSING - Static variable in class org.primordion.xholon.io.xml.XMLConstants
 
FeatureType_Null - Static variable in interface org.primordion.cellontro.base.IBioXholonClass
 
FibonacciFunctionCE - Static variable in interface org.primordion.dynsys.app.CeFibonacci
 
FibonacciSystemCE - Static variable in interface org.primordion.dynsys.app.CeFibonacci
 
FibrilCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
FilamentCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
File - Class in org.primordion.xholon.service.gist
JavaScript overlay of a JSONP gist File object.
FileChooserUICE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
fillColorArray(RGBTypeDouble[], int, int) - Method in class org.primordion.cellontro.io.vrml.VrmlColorCell
Fill color array.
fillColorArray(RGBTypeDouble[], int, int) - Method in interface org.primordion.xholon.io.vrml.IVrmlColor
 
FILTERID_NONE - Static variable in interface org.primordion.xholon.base.IPatch
 
FILTERID_NONE - Static variable in interface org.primordion.xholon.base.ITurtle
 
finalizeCE - Static variable in interface org.primordion.xholon.common.mechanism.CeScxmlEntity
 
FinalNodeCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActivityEntity
 
FinalStateCE - Static variable in interface org.primordion.xholon.common.mechanism.CeStateMachineEntity
 
findAnnotation(IXholon) - Method in class org.primordion.ef.Xholon2CherryTree
 
findAnnotation(IXholon) - Method in class org.primordion.ef.Xholon2Csv
 
findAnnotation(IXholon) - Method in class org.primordion.ef.Xholon2HtmlForm
 
findAnnotation(IXholon) - Method in class org.primordion.ef.Xholon2Json
 
findAnnotation(IXholon) - Method in class org.primordion.ef.Xholon2Yaml
 
findAnnotation(IXholon) - Method in interface org.primordion.xholon.io.xml.IXholon2Xml
Try to find an annotation for the node.
findAnnotation(IXholon) - Method in class org.primordion.xholon.io.xml.Xholon2Xml
 
findAppSpecificClass(String) - Method in class org.primordion.xholon.app.Application
 
findAppSpecificClass(String) - Method in interface org.primordion.xholon.app.IApplication
Find an app-specific class that corresponds to a class name.
findAppSpecificConstantValue(Class<?>, String) - Method in class org.primordion.xholon.app.Application
 
findAppSpecificConstantValue(Class<?>, String) - Method in interface org.primordion.xholon.app.IApplication
Find a class Integer constant, given the name of the constant.
findArraySize(List<PortInformation>, String) - Static method in class org.primordion.xholon.base.PortInformation
A List, as returned by XholonClass, may contain multiple scalar ports along with multiple array ports.
findFirstChildWithAncestorXhClass(IXholon, int) - Method in interface org.primordion.xholon.service.xholonhelper.IFindChildSibWith
Find a context node's first child with an ancestor (possibly itself) that matches the specified XholonClass id.
findFirstChildWithAncestorXhClass(IXholon, String) - Method in interface org.primordion.xholon.service.xholonhelper.IFindChildSibWith
Find a context node's first child with an ancestor (possibly itself) that matches the specified XholonClass name.
findFirstChildWithAncestorXhClass(IXholon, int) - Method in class org.primordion.xholon.service.XholonHelperService
 
findFirstChildWithAncestorXhClass(IXholon, String) - Method in class org.primordion.xholon.service.XholonHelperService
 
findFirstChildWithRoleName(IXholon, String) - Method in interface org.primordion.xholon.service.xholonhelper.IFindChildSibWith
Find a context node's first child with the specified role name.
findFirstChildWithRoleName(IXholon, String) - Method in class org.primordion.xholon.service.XholonHelperService
 
findFirstChildWithXhClass(int) - Method in interface org.primordion.xholon.base.IXholon
Find the first child that matches the specified XholonClass id.
findFirstChildWithXhClass(String) - Method in interface org.primordion.xholon.base.IXholon
Find the first child that matches the specified XholonClass name.
findFirstChildWithXhClass(int) - Method in class org.primordion.xholon.base.Xholon
 
findFirstChildWithXhClass(String) - Method in class org.primordion.xholon.base.Xholon
 
findFirstChildWithXhClass(IXholon, int) - Method in interface org.primordion.xholon.service.xholonhelper.IFindChildSibWith
Find a context node's first child that matches the specified XholonClass id.
findFirstChildWithXhClass(IXholon, String) - Method in interface org.primordion.xholon.service.xholonhelper.IFindChildSibWith
Find a context node's first child that matches the specified XholonClass name.
findFirstChildWithXhClass(IXholon, int) - Method in class org.primordion.xholon.service.XholonHelperService
 
findFirstChildWithXhClass(IXholon, String) - Method in class org.primordion.xholon.service.XholonHelperService
 
findGwtClientBundle() - Method in class org.primordion.ctrnn.AdapSysLab.AppAdapSysLab
 
findGwtClientBundle() - Method in class org.primordion.dynsys.app.leakybucket.Appleakybucket
 
findGwtClientBundle() - Method in class org.primordion.dynsys.app.stability.Appstability
 
findGwtClientBundle() - Method in class org.primordion.user.app.azimuth.pn01.Apppn
 
findGwtClientBundle() - Method in class org.primordion.user.app.Bestiary.AppBestiary
 
findGwtClientBundle() - Method in class org.primordion.user.app.bigraph.roomsghosts.Approomsghosts
 
findGwtClientBundle() - Method in class org.primordion.user.app.climatechange.igm.Appigm
 
findGwtClientBundle() - Method in class org.primordion.user.app.climatechange.mdcs.m2_1mp.Appmdcs
 
findGwtClientBundle() - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.Appmdcs
 
findGwtClientBundle() - Method in class org.primordion.user.app.climatechange.solarsystemtest.Appsolarsystemtest
 
findGwtClientBundle() - Method in class org.primordion.user.app.GameOfLife.AppGameOfLife
 
findGwtClientBundle() - Method in class org.primordion.user.app.petrinet.feinberg1.Appfeinberg1
 
findGwtClientBundle() - Method in class org.primordion.user.app.testNodePorts.ApptestNodePorts
 
findGwtClientBundle() - Method in class org.primordion.user.app.Turnstile.AppTurnstile
 
findGwtClientBundle() - Method in class org.primordion.user.app.TurtleExample1.AppTurtleExample1
 
findGwtClientBundle() - Method in class org.primordion.xholon.app.Application
 
findGwtClientBundle() - Method in class org.primordion.xholon.app.Chameleon.AppChameleon
 
findGwtClientBundle() - Method in class org.primordion.xholon.app.Furcifer.AppFurcifer
 
findGwtClientBundle() - Method in interface org.primordion.xholon.app.IApplication
Return an instance of com.google.gwt.resources.client.ClientBundleWithLookup .
findMechanism(String) - Method in interface org.primordion.xholon.base.IMechanism
Find a Mechanism node that matches the specified NamespaceUri.
findMechanism(String) - Method in class org.primordion.xholon.base.Mechanism
 
findNextSiblingWithAncestorXhClass(IXholon, int) - Method in interface org.primordion.xholon.service.xholonhelper.IFindChildSibWith
Find a context node's next sibling with an ancestor (possibly itself) that matches the specified XholonClass id.
findNextSiblingWithAncestorXhClass(IXholon, int) - Method in class org.primordion.xholon.service.XholonHelperService
 
findNextSiblingWithXhClass(IXholon, int) - Method in interface org.primordion.xholon.service.xholonhelper.IFindChildSibWith
Find a context node's next sibling that matches the specified XholonClass id.
findNextSiblingWithXhClass(IXholon, int) - Method in class org.primordion.xholon.service.XholonHelperService
 
finishSetup() - Method in class org.primordion.xholon.service.svg.SvgViewBrowser
Finish the setup after the SVG diagram has loaded.
fireEvent(String) - Method in class org.fr.lri.swingstates.sm.StateMachine
Makes this state machine fire a virtual event having a given name that will be heard by all its StateMachineListener.
fireEvent(EventObject) - Method in class org.fr.lri.swingstates.sm.StateMachine
Makes this state machine fire an event that will be heard by all its StateMachineListener.
FiringTransitionBehavior - Class in org.primordion.xholon.mech.petrinet.grid
A transition may fire each time step, depending on what places it's co-located with.
FiringTransitionBehavior() - Constructor for class org.primordion.xholon.mech.petrinet.grid.FiringTransitionBehavior
 
FiringTransitionBehaviorCE - Static variable in interface org.primordion.xholon.common.mechanism.CePetriNetEntity
 
FlagCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
FlagPass - Class in org.primordion.user.app.English2French
 
FlagPass() - Constructor for class org.primordion.user.app.English2French.FlagPass
 
FlagPassCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
FlagsCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
FloorCE - Static variable in interface org.primordion.user.xmiapps.Elevator.CeElevator
 
floorCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
FloorSelectionButtonCE - Static variable in interface org.primordion.user.xmiapps.Elevator.CeElevator
 
FlowFinalNodeCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActivityEntity
 
FlowLayoutCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
Flows - Class in org.primordion.user.app.climatechange.carboncycle03
Cache all the reservoirs to make it easier for Flow objects to find them.
Flows() - Constructor for class org.primordion.user.app.climatechange.carboncycle03.Flows
 
flush() - Method in class org.primordion.ef.other.Xholon2Xgmml
 
flush() - Method in class org.primordion.ef.Xholon2GraphML
 
flush() - Method in class org.primordion.xholon.io.cherrytree.CherryTreeStrWriter
 
flush() - Method in class org.primordion.xholon.io.csv.CsvStrWriter
 
flush() - Method in class org.primordion.xholon.io.htmlform.HtmlFormStrWriter
 
flush() - Method in class org.primordion.xholon.io.json.JsonStrWriter
 
flush() - Method in interface org.primordion.xholon.io.xml.IXmlWriter
Write any cached data to the underlying output mechanism.
flush() - Method in class org.primordion.xholon.io.xml.XmlStrWriter
 
flush() - Method in class org.primordion.xholon.io.xml.XmlWriter
 
flush() - Method in class org.primordion.xholon.io.yaml.YamlStrWriter
 
Flux - Class in org.primordion.user.app.climatechange.mdcs.m2_1mp
A flux is an object (a mathematical vector) that contains a magnitude and a direction.
Flux() - Constructor for class org.primordion.user.app.climatechange.mdcs.m2_1mp.Flux
 
Flux - Class in org.primordion.user.app.climatechange.mdcs.m2_2mp
A flux is an object (related to a mathematical vector, and a Xholon message) that contains a magnitude and a direction.
Flux() - Constructor for class org.primordion.user.app.climatechange.mdcs.m2_2mp.Flux
 
Fluxes - Class in org.primordion.user.app.climatechange.mdcs.m2_2mp
Fluxes is a container for Flux objects.
Fluxes() - Constructor for class org.primordion.user.app.climatechange.mdcs.m2_2mp.Fluxes
 
food - Variable in class org.primordion.ealontro.app.AntForaging.XhAntForaging
 
FoodCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
FoodCE - Static variable in interface org.primordion.ealontro.app.AntForaging.CeAntForaging
 
FoodCE - Static variable in interface org.primordion.ealontro.app.EcjAntTrail.CeAntTrail
 
foodProductionRate - Variable in class org.primordion.user.app.StupidModel.sm15.HabitatCellStupidModel15
 
foodProductionRate - Variable in class org.primordion.user.app.StupidModel.sm16.HabitatCellStupidModel16
 
foodProductionRate - Variable in class org.primordion.user.app.StupidModel.sm16nl.HabitatCellStupidModel16nl
 
forallCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
force - Variable in class org.primordion.dynsys.app.XhTrain
 
ForceCE - Static variable in interface org.primordion.ealontro.app.CartCentering.CeCartCentering
 
ForeBrainCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
ForkNodeCE - Static variable in interface org.primordion.xholon.common.mechanism.CeUMLActivityEntity
 
format(String) - Method in class org.primordion.xholon.io.xml.XmlPrettyPrinter
 
format(String, String, String) - Method in class org.primordion.xholon.io.xml.XmlPrettyPrinter
GWT version source: http://stackoverflow.com/questions/5657181/use-xslt-to-pretty-print-xml-xhtml-without-corrupting-namespace-info
format(String, double) - Static method in class org.primordion.xholon.util.StringHelper
Round a number to a specified number of decimal places.
format(String, boolean) - Static method in class org.primordion.xholon.util.StringHelper
Return a String representation of a boolean.
format(String, char) - Static method in class org.primordion.xholon.util.StringHelper
Return a String representation of a char.
format(String, int) - Static method in class org.primordion.xholon.util.StringHelper
Return a String representation of a int.
format(String, Object) - Static method in class org.primordion.xholon.util.StringHelper
Return a String representation of a String or other Object.
format(String, String, String, String) - Static method in class org.primordion.xholon.util.StringHelper
Return a concatenation of three strings.
FORMAT_NONE - Static variable in interface org.primordion.xholon.base.IInteraction
 
FORMAT_PLANTUML - Static variable in interface org.primordion.xholon.base.IInteraction
 
FORMAT_ROSE - Static variable in interface org.primordion.xholon.base.IInteraction
 
FORMAT_SDEDIT - Static variable in interface org.primordion.xholon.base.IInteraction
 
FORMAT_SDEDIT_SOCKET - Static variable in interface org.primordion.xholon.base.IInteraction
 
FORMAT_UML_GRAPH - Static variable in interface org.primordion.xholon.base.IInteraction
 
FORMAT_WEBSD - Static variable in interface org.primordion.xholon.base.IInteraction
 
FormLayoutCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
forward(double) - Method in interface org.primordion.xholon.base.ITurtle
Move forward a given distance.
forward(double) - Method in class org.primordion.xholon.base.Turtle
 
forwardMessage(IMessage) - Method in class org.primordion.xholon.app.Chameleon.XhChameleon
 
forwardMessage(IMessage) - Method in class org.primordion.xholon.app.Furcifer.XhFurcifer
 
forwardMessage(IMessage) - Method in interface org.primordion.xholon.base.IXholon
Forward a message to a registered forwardee, if any.
forwardMessage(IMessage) - Method in class org.primordion.xholon.base.Xholon
 
forwardSyncMessage(IMessage) - Method in class org.primordion.xholon.app.Chameleon.XhChameleon
 
forwardSyncMessage(IMessage) - Method in interface org.primordion.xholon.base.IXholon
Forward a message to a registered forwardee, if any.
forwardSyncMessage(IMessage) - Method in class org.primordion.xholon.base.Xholon
 
FossilCarbon - Class in org.primordion.user.app.climatechange.carboncycle03
 
FossilCarbon() - Constructor for class org.primordion.user.app.climatechange.carboncycle03.FossilCarbon
 
FourLetterCodeCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
Fr2EngSystemCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
FrameCE - Static variable in interface org.primordion.xholon.common.viewer.CeSwingEntity
 
FreedomOfMovementCatbehavior - Class in org.primordion.user.app.Bestiary
A cat wants its freedom of movement.
FreedomOfMovementCatbehavior() - Constructor for class org.primordion.user.app.Bestiary.FreedomOfMovementCatbehavior
 
FreeNerveEndingCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
FreeNerveEndingNeuronCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
friction - Variable in class org.primordion.dynsys.app.XhTrain
 
fromString(String, boolean) - Static method in class org.primordion.xholon.io.gwt.HtmlScriptHelper
Inject a script into the app, and execute it once.
FromSurfaceLw - Class in org.primordion.user.app.climatechange.igm
 
FromSurfaceLw() - Constructor for class org.primordion.user.app.climatechange.igm.FromSurfaceLw
 
fromUrl(String, boolean) - Static method in class org.primordion.xholon.io.gwt.HtmlScriptHelper
Inject a script into the app.
FrqCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
FrqCE - Static variable in interface org.primordion.user.app.XBar.CeXBar
 
FrqCE - Static variable in interface org.primordion.user.app.XBar.CeXBar_ex1
 
Fructose_1x6_BiphosphateCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
Fructose_1x6_BiphosphateCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
Fructose_1x6_BiphosphateCE - Static variable in interface org.primordion.cellontro.app.sbml.CeGlycolysis
 
Fructose_1x6_bisphosphataseCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
Fructose_2x6_BiphosphateCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
Fructose_6_PhosphateCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
Fructose_6_PhosphateCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
Fructose_6_PhosphateCE - Static variable in interface org.primordion.cellontro.app.sbml.CeGlycolysis
 
FsmXholon_14_147CE - Static variable in interface org.primordion.user.xmiapps.TestFsmHistory.CeTestFsmHistory
 
FsmXholon_14_147deepCE - Static variable in interface org.primordion.user.xmiapps.TestFsmHistory.CeTestFsmHistory
 
FsmXholon_14_169CE - Static variable in interface org.primordion.user.xmiapps.TestFsmJunction.CeTestFsmJunction
 
FsmXholon_14_170CE - Static variable in interface org.primordion.user.xmiapps.TestFsmJunction.CeTestFsmJunction
 
FsmXholon_14_68CE - Static variable in interface org.primordion.user.xmiapps.TestFsmForkJoin.CeTestFsmForkJoin
 
FsmXholon_14_71CE - Static variable in interface org.primordion.user.xmiapps.TestFsmForkJoin.CeTestFsmForkJoin
 
FsmXholonCE - Static variable in interface org.primordion.user.app.TestFsm.CeTestFsmKW
 
FsmXholonCE - Static variable in interface org.primordion.user.xmiapps.TestFsm.CeTestFsm
 
FsmXholonCE - Static variable in interface org.primordion.user.xmiapps.TestFsmOrthogonal.CeTestFsmOrthogonal
 
Fuddifier - Class in org.primordion.xholon.service.processor
A TreeProcessor that fuddifies a Xholon tree or subtree.
Fuddifier() - Constructor for class org.primordion.xholon.service.processor.Fuddifier
 
FumarateCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
FumarateCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
FumarateHydrataseCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
FumarateHydrataseCE - Static variable in interface org.primordion.cellontro.app.sbml.CeCellModel
 
FunctionCE - Static variable in interface org.primordion.dynsys.app.CeFibonacci
 
functionsCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
FurciferAll - Class in org.primordion.xholon.app.Furcifer
Furcifer application - Xholon Java This class has all types of variables, etc.
FurciferAll() - Constructor for class org.primordion.xholon.app.Furcifer.FurciferAll
 
FurciferCE - Static variable in interface org.primordion.xholon.app.Furcifer.CeFurcifer
 

G

g - Static variable in class org.primordion.dynsys.app.XhTrain
 
g - Variable in class org.primordion.xholon.io.vrml.RGBTypeDouble
 
g - Variable in class org.primordion.xholon.io.vrml.RGBTypeInt
 
G1PCE - Static variable in interface org.primordion.user.xmiapps.Rcs_GP_FSM.CeRcs_GP_FSM
 
G1PCE - Static variable in interface org.primordion.user.xmiapps.Rcs_GP_FSM_Grid.CeRcs_GP_FSM_Grid
 
G1PCE - Static variable in interface org.primordion.user.xmiapps.Rcs_GP_MM.CeRcs_GP_MM
 
G3PDHCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
G6PCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
G_CEL_BCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
G_CIL_ACE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
G_CIL_BCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
G_CILCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
G_COMPUTER - Static variable in interface org.primordion.user.app.MeTTTa.IMeTTTaConstants
This grid position played by computer.
G_HUMAN - Static variable in interface org.primordion.user.app.MeTTTa.IMeTTTaConstants
This grid position played by human.
G_NULL - Static variable in interface org.primordion.user.app.MeTTTa.IMeTTTaConstants
This grid position not yet played.
G_PLU_SCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
G_QUE_ACE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
G_SUP_ACE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
GabaAReceptorCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
GaiaCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
Galactose_1_PhosphateCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
Galaxy - Class in org.primordion.xholon.app.Furcifer
Test class with one or more named ports.
Galaxy() - Constructor for class org.primordion.xholon.app.Furcifer.Galaxy
 
GalaxyCE - Static variable in interface org.primordion.xholon.app.Furcifer.CeFurcifer
 
GameController - Class in org.primordion.user.app.Risk
Game Controller,
GameController() - Constructor for class org.primordion.user.app.Risk.GameController
 
GameModel - Class in org.primordion.user.app.Risk
The Model in Risk consists of all the domain-specific nodes, those nodes that have to do specifically with the game of Risk.
GameModel() - Constructor for class org.primordion.user.app.Risk.GameModel
 
GameOfLifeCE - Static variable in interface org.primordion.user.app.GameOfLife.CeGameOfLife
 
GameOfLifePattern - Class in org.primordion.user.app.GameOfLife
There are many interesting patterns in the Game of Life.
GameOfLifePattern() - Constructor for class org.primordion.user.app.GameOfLife.GameOfLifePattern
 
GameView - Class in org.primordion.user.app.Risk
Game View The view is implemented using SVG, and the SVG Salamander library.
GameView() - Constructor for class org.primordion.user.app.Risk.GameView
 
GanglionCellCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
GAPCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
GAPDHCE - Static variable in interface org.primordion.cellontro.app.sbml.CeYeastGlyPritchardKel
 
GaseousSolutionCE - Static variable in interface org.primordion.cellontro.app.CeLife
 
GasExchangeDown - Class in org.primordion.user.app.climatechange.carboncycle03
 
GasExchangeDown() - Constructor for class org.primordion.user.app.climatechange.carboncycle03.GasExchangeDown
 
GasExchangeUp - Class in org.primordion.user.app.climatechange.carboncycle03
 
GasExchangeUp() - Constructor for class org.primordion.user.app.climatechange.carboncycle03.GasExchangeUp
 
gcdCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
gCE - Static variable in interface org.primordion.memcomp.app.SymAnti02ex41.CeSymAnti02ex41
 
GenderCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
GenderFCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
GenderFPCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
GenderFSCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
GenderMCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
GenderMPCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
GenderMSCE - Static variable in interface org.primordion.user.app.English2French.CeEnglish2French
 
generate(TreeLogger, GeneratorContext, String) - Method in class org.server.AppGenerator
 
generate(TreeLogger, GeneratorContext, String) - Method in class org.server.ExternalFormatServiceGenerator
 
GenericViewerService - Class in org.primordion.xholon.service
A service that creates a variety of viewers.
GenericViewerService() - Constructor for class org.primordion.xholon.service.GenericViewerService
 
GenericViewerServiceCE - Static variable in interface org.primordion.xholon.common.mechanism.CeXholonService
 
GeneticProgramCE - Static variable in interface org.primordion.ealontro.app.AntForaging.CeAntForaging
 
GeneticProgramCE - Static variable in interface org.primordion.ealontro.app.CartCentering.CeCartCentering
 
GeneticProgramCE - Static variable in interface org.primordion.ealontro.app.EcjAntTrail.CeAntTrail
 
GeneticProgramCE - Static variable in interface org.primordion.ealontro.app.EcjTutorial4.CeTutorial4
 
geneVal - Variable in class org.primordion.cellontro.base.BioXholonClass
 
GENEVAL_EFF_KM - Static variable in interface org.primordion.cellontro.base.IBioXholonClass
 
GENEVAL_KM - Static variable in interface org.primordion.cellontro.base.IBioXholonClass
 
GENEVAL_V - Static variable in interface org.primordion.cellontro.base.IBioXholonClass
 
geqCE - Static variable in interface org.primordion.xholon.mech.mathml.CeMathML
 
get(int) - Method in class org.primordion.xholon.base.XholonList
 
get(Object) - Method in class org.primordion.xholon.base.XholonMap
 
get() - Method in class org.primordion.xholon.io.vrml.Rotations
Get a random rotation.
get() - Method in class org.primordion.xholon.io.vrml.VrmlBuffer
Get the internal buffer.
get(String) - Method in class org.primordion.xholon.service.XholonDirectoryService
Get a Object or IXholon instance that matches a String key.
get2XmlRoot() - Method in class org.primordion.ef.Xholon2CherryTree
 
get2XmlRoot() - Method in class org.primordion.ef.Xholon2Csv
 
get2XmlRoot() - Method in class org.primordion.ef.Xholon2HtmlForm
 
get2XmlRoot() - Method in class org.primordion.ef.Xholon2Json
 
get2XmlRoot() - Method in class org.primordion.ef.Xholon2Yaml
 
get2XmlRoot() - Method in interface org.primordion.xholon.io.xml.IXholon2Xml
Get the root of the Xholon subtree being transformed into XML.
get2XmlRoot() - Method in class org.primordion.xholon.io.xml.Xholon2Xml
 
getABooleanFalse() - Method in class org.primordion.user.xmiapps.TestFsm.XhTestFsm
 
getABooleanTrue() - Method in class org.primordion.user.xmiapps.TestFsm.XhTestFsm
 
getAbout() - Method in class org.primordion.xholon.app.Application
 
getAbout() - Method in interface org.primordion.xholon.app.IApplication
Get some text that can be used to describe what Xholon is about.
getAbsorbedByAtmosphere() - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.Atmosphere
 
getAbsorbedByAtmosphere() - Method in class org.primordion.user.app.climatechange.model04.Atmosphere
 
getAbsorbedBySurfaceLw() - Method in class org.primordion.user.app.climatechange.model04.Surface
 
getAbsorbedBySurfaceSw() - Method in class org.primordion.user.app.climatechange.model04.Surface
 
getAbsorption() - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.Atmosphere
 
getAByte() - Method in class org.primordion.user.xmiapps.TestFsm.XhTestFsm
 
getAcceleration() - Method in class org.primordion.dynsys.app.stability.Ball
 
getAcceleration() - Method in class org.primordion.dynsys.app.XhTrain
 
getAChar() - Method in class org.primordion.user.xmiapps.TestFsm.XhTestFsm
 
getAction() - Method in class org.primordion.user.app.Bestiary.BestiaryPattern
 
getAction() - Method in class org.primordion.user.app.Bestiary.LatLonPattern
 
getAction() - Method in class org.primordion.user.app.GameOfLife.GameOfLifePattern
 
getAction() - Method in class org.primordion.xholon.base.XholonNode
 
getActionList() - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.Fluxes
 
getActionList() - Method in class org.primordion.user.app.English2French.Lexicon
 
getActionList() - Method in class org.primordion.user.app.English2French.rule.Rule_C_FEM_A
 
getActionList() - Method in class org.primordion.user.app.English2French.rule.Rule_G_CIL
 
getActionList() - Method in class org.primordion.user.app.English2French.Transforms
 
getActionList() - Method in class org.primordion.user.app.Risk.Player
 
getActionList() - Method in class org.primordion.xholon.base.Behavior_gwtjs
 
getActionList() - Method in interface org.primordion.xholon.base.IXholon
Get a list of actions that this xholon can do.
getActionList() - Method in class org.primordion.xholon.base.Queue
 
getActionList() - Method in class org.primordion.xholon.base.QueueSynchronized
 
getActionList() - Method in class org.primordion.xholon.base.Xholon
 
getActionList() - Method in class org.primordion.xholon.io.Specials
 
getActionList() - Method in class org.primordion.xholon.mech.petrinet.AnalysisPetriNet
 
getActionList() - Method in class org.primordion.xholon.mech.petrinet.cat.AnalysisCat
 
getActionList() - Method in class org.primordion.xholon.mech.petrinet.crn.AnalysisCRN
 
getActionList() - Method in class org.primordion.xholon.mech.petrinet.grid.GridOwner
 
getActionList() - Method in class org.primordion.xholon.mech.petrinet.memcomp.AnalysisMemComp
 
getActionList() - Method in class org.primordion.xholon.service.ExternalFormatService
 
getActionList() - Method in class org.primordion.xholon.service.NodeSelectionService
 
getActionList() - Method in class org.primordion.xholon.service.nosql.Neo4jRestApi
 
getActionList() - Method in class org.primordion.xholon.service.RecordPlaybackService
 
getActionList() - Method in class org.primordion.xholon.service.SearchEngineService
 
getActionList() - Method in class org.primordion.xholon.service.ServiceLocatorService
 
getActionList() - Method in class org.primordion.xholon.service.svg.SvgViewBrowser
 
getActionList() - Method in class org.primordion.xholon.service.WiringService
 
getActionList() - Method in class org.primordion.xholon.service.XholonDirectoryService
 
getActionList() - Method in class org.primordion.xholon.service.XPathService
 
getActivation() - Method in class org.primordion.ctrnn.AdapSysLab.XhAbstractCtrnn
 
getActiveObjectType() - Method in class org.primordion.cellontro.base.BioXholonClass
 
getActiveObjectType() - Method in interface org.primordion.cellontro.base.IBioXholonClass
Get active object type.
getActivityId() - Method in interface org.primordion.xholon.base.IStateMachineEntity
Return the activity ID of a transition.
getActivityId() - Method in class org.primordion.xholon.base.StateMachineEntity
 
getADouble() - Method in class org.primordion.user.xmiapps.TestFsm.XhTestFsm
 
getAFloat() - Method in class org.primordion.user.xmiapps.TestFsm.XhTestFsm
 
getAggregator(IXholon) - Method in class org.primordion.xholon.base.PatchOwner
Return the aggregator for the specified turtle or patch.
getAlbedo() - Method in class org.primordion.user.app.climatechange.igm.ReflectedSw
 
getAlbedo() - Method in class org.primordion.user.app.climatechange.mdcs.m2_1mp.Surface
 
getAlbedo() - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.Atmosphere
 
getAlbedo() - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.Surface
 
getAlbedo() - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.TopOfAtmosphere
 
getAlbedo() - Method in class org.primordion.user.app.climatechange.model04.Atmosphere
 
getAlbedo() - Method in class org.primordion.user.app.climatechange.model04.Earth
 
getAlbedo() - Method in class org.primordion.user.app.climatechange.model04.Surface
 
getAlbedoMultiplier() - Method in class org.primordion.user.app.climatechange.model04.Earth
 
getAllPorts() - Method in class org.primordion.user.app.Bestiary.Beast
 
getAllPorts() - Method in class org.primordion.user.app.Bestiary.XhBestiary
 
getAllPorts() - Method in class org.primordion.user.app.RavaszHnm.XhRavaszHnm
 
getAllPorts() - Method in class org.primordion.user.app.testNodePorts.XhtestNodePorts
 
getAllPorts() - Method in class org.primordion.xholon.app.Chameleon.XhChameleon
 
getAllPorts() - Method in class org.primordion.xholon.app.Furcifer.FurciferAll
 
getAllPorts() - Method in class org.primordion.xholon.app.Furcifer.XhFurcifer
 
getAllPorts() - Method in class org.primordion.xholon.base.AbstractGrid
 
getAllPorts() - Method in class org.primordion.xholon.base.Behavior_gwtjs
 
getAllPorts(IXholon, boolean) - Method in interface org.primordion.xholon.base.IReflection
Get a list of all ports exiting from this xholon.
getAllPorts(IXholon, boolean, String) - Method in interface org.primordion.xholon.base.IReflection
Get a list of ports exiting from this xholon, with the specified port name.
getAllPorts() - Method in interface org.primordion.xholon.base.IXholon
Get a list of all ports exiting from this xholon.
getAllPorts(IXholon, boolean) - Method in class org.primordion.xholon.base.ReflectionJavaMicro
 
getAllPorts(IXholon, boolean, String) - Method in class org.primordion.xholon.base.ReflectionJavaMicro
 
getAllPorts() - Method in class org.primordion.xholon.base.Xholon
 
getAllPorts() - Method in class org.primordion.xholon.mech.petrinet.Arc
 
getAllPorts() - Method in class org.primordion.xholon.mech.petrinet.Transition
 
getAllStates() - Method in class org.fr.lri.swingstates.sm.StateMachine
Returns the vector containing all this state machine's states.
getALong() - Method in class org.primordion.user.xmiapps.TestFsm.XhTestFsm
 
getAmount() - Method in class org.primordion.xholon.service.mathscieng.QuantityScalar
Get Amount.
getAngle() - Method in class org.primordion.ef.d3.Xholon2Cloud
 
getAnInteger() - Method in class org.primordion.user.xmiapps.TestFsm.XhTestFsm
 
getAnnotation() - Method in class org.primordion.xholon.app.Furcifer.FurciferAll
 
getAnnotation() - Method in interface org.primordion.xholon.base.IXholon
Get the contents of the annotation for this Xholon.
getAnnotation() - Method in class org.primordion.xholon.base.Xholon
 
getAnnotation() - Method in class org.primordion.xholon.mech.mathml.content.Cn
 
getApp() - Method in class org.primordion.xholon.app.Application
 
getApp() - Method in class org.primordion.xholon.base.Control
By definition, a Control node's root node is the instance of IApplication.
getApp() - Method in interface org.primordion.xholon.base.IXholon
Get the instance of Application that owns this Xholon instance and the model of which it is a part.
getApp() - Method in class org.primordion.xholon.base.Xholon
 
getApp() - Method in class org.primordion.xholon.base.XholonClass
 
getApp() - Method in interface org.primordion.xholon.io.console.IXholonConsole
 
getApp() - Method in class org.primordion.xholon.io.console.XholonConsole
 
getApp() - Method in class org.primordion.xholon.service.XholonCreationService
 
getApp() - Method in class org.primordion.xholon.service.xholonhelper.CutCopyPaste
This xholon is a child of a service, so it can determine its Application by asking for its parent's Application.
getApplication(IXholon) - Static method in class org.primordion.xholon.app.Application
Get the instance of Application that the Xholon node is part of.
getApplication(String) - Static method in class org.primordion.xholon.app.Application
Get the first instance of Application that has the specified name.
getApplication() - Static method in class org.primordion.xholon.app.Application
Get the singleton instance of Application.
getApplicationNames() - Static method in class org.primordion.xholon.app.Application
Get the names of all current applications.
getApplicationOther(IXholon) - Method in class org.primordion.xholon.app.Application
 
getApplicationOther(String) - Method in class org.primordion.xholon.app.Application
 
getApplicationOther(IXholon) - Method in interface org.primordion.xholon.app.IApplication
Get the instance of Application that the Xholon node is part of.
getApplicationOther(String) - Method in interface org.primordion.xholon.app.IApplication
Get the first instance of Application that has the specified name.
getApplications() - Static method in class org.primordion.xholon.app.Application
Get all current applications.
getAppM() - Method in class org.primordion.xholon.app.Application
 
getAppRoot() - Method in class org.primordion.xholon.app.Application
 
getAppRoot() - Method in interface org.primordion.xholon.app.IApplication
Get the application root.
getAppSpecificAttribute(IXholon, Class<IXholon>, String) - Method in class org.client.SystemMechSpecific
 
getAppSpecificAttribute(IXholon, Class<IXholon>, String) - Method in class org.primordion.user.app.helloworldjnlp.AppHelloWorld
 
getAppSpecificAttribute(IXholon, Class<IXholon>, String) - Method in class org.primordion.xholon.app.Application
 
getAppSpecificAttribute(IXholon, Class<IXholon>, String) - Method in interface org.primordion.xholon.app.IApplication
Get the value of an application-specific non-port attribute.
getAppSpecificAttributes(IXholon, Class<IXholon>, boolean) - Method in class org.client.SystemMechSpecific
 
getAppSpecificAttributes(IXholon, Class<IXholon>, boolean) - Method in class org.primordion.user.app.helloworldjnlp.AppHelloWorld
 
getAppSpecificAttributes(IXholon, Class<IXholon>, boolean) - Method in class org.primordion.xholon.app.Application
 
getAppSpecificAttributes(IXholon, Class<IXholon>, boolean) - Method in interface org.primordion.xholon.app.IApplication
Get all application-specific attributes that are accessible using a method that starts with "get" or "is".
getAppSpecificAttributes(IXholon, boolean, boolean, boolean) - Method in interface org.primordion.xholon.base.IReflection
Get all application-specific attributes that are accessible using a method that starts with "get".
getAppSpecificAttributes(IXholon, boolean, boolean, boolean) - Method in class org.primordion.xholon.base.ReflectionJavaMicro
 
getAppSpecificObjectVal(IXholon, Class<IXholon>, String) - Method in class org.client.SystemMechSpecific
 
getAppSpecificObjectVal(IXholon, Class<IXholon>, String) - Method in class org.primordion.xholon.app.Application
 
getAppSpecificObjectVal(IXholon, Class<IXholon>, String) - Method in interface org.primordion.xholon.app.IApplication
Get the value of an Object attribute, using a getter method.
getAppSpecificObjectValNames(IXholon, Class<IXholon>) - Method in class org.client.SystemMechSpecific
 
getAppSpecificObjectValNames(IXholon, Class<IXholon>) - Method in class org.primordion.xholon.app.Application
 
getAppSpecificObjectValNames(IXholon, Class<IXholon>) - Method in interface org.primordion.xholon.app.IApplication
Get a list of port names for a node.
getAppSpecificObjectVals(IXholon, Class<IXholon>) - Method in class org.primordion.xholon.app.Application
 
getAppSpecificObjectVals(IXholon, Class<IXholon>) - Method in interface org.primordion.xholon.app.IApplication
keep it consistent with getAllPorts, or return an array ? Get a list of ports for a node.
getAppSpecificParam1() - Method in class org.primordion.user.app.RavaszHnm.AppRavaszHnm
 
getAppSpecificParam1() - Static method in class org.primordion.user.app.RavaszHnm.XhRavaszHnm
 
getAppSpecificParam1() - Method in class org.primordion.user.app.Red.AppRed
 
getAppSpecificParam1() - Static method in class org.primordion.user.app.Red.XhRed
 
getAppSpecificParam1() - Method in class org.primordion.user.app.TurtleExample1.AppTurtleExample1
 
getAppSpecificParam1() - Method in class org.primordion.user.app.TurtleExample1.TurtleExample
 
getAppSpecificParam1() - Static method in class org.primordion.user.app.TurtleExample1.XhTurtleExample1
 
getAppSpecificParam1() - Method in class org.primordion.user.app.TweenTrees.AppTweenTrees
 
getAppSpecificParam1() - Static method in class org.primordion.user.app.TweenTrees.XhTweenTrees
 
getAppSpecificParam1() - Method in class org.primordion.user.xmiapps.__XholonTemplate__.App__XholonTemplate__
 
getAppSpecificParam1() - Static method in class org.primordion.user.xmiapps.__XholonTemplate__.Xh__XholonTemplate__
 
getArea() - Method in class org.primordion.dynsys.app.leakybucket.Bucket
 
getArea() - Method in class org.primordion.dynsys.app.leakybucket.Hole
 
getAreaOfBucket() - Method in class org.primordion.dynsys.app.leakybucket.Water
 
getAreaOfHole() - Method in class org.primordion.dynsys.app.leakybucket.Outflow
 
getArrivalFloor() - Method in class org.primordion.user.xmiapps.Elevator.XhElevator
 
getArrowhead() - Method in class org.primordion.ef.Xholon2Graphviz
 
getAShort() - Method in class org.primordion.user.xmiapps.TestFsm.XhTestFsm
 
getAStaticInt() - Static method in class org.primordion.user.xmiapps.TestFsm.XhTestFsm
 
getAString() - Method in class org.primordion.user.xmiapps.TestFsm.XhTestFsm
 
getAtmosphere() - Method in class org.primordion.user.app.climatechange.carboncycle03.Flows
 
getAtmosphere() - Method in class org.primordion.user.app.climatechange.igm.Viewable
 
getAtmosphere() - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.Surface
 
getAtmosphere() - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.TopOfAtmosphere
 
getAtmosphere() - Method in class org.primordion.user.app.climatechange.model04.CarbonDioxide
 
getAtmosphere() - Method in class org.primordion.user.app.climatechange.model04.Cfc11
 
getAtmosphere() - Method in class org.primordion.user.app.climatechange.model04.Cfc12
 
getAtmosphere() - Method in class org.primordion.user.app.climatechange.model04.Methane
 
getAtmosphere() - Method in class org.primordion.user.app.climatechange.model04.NitrousOxide
 
getAtmosphere() - Method in class org.primordion.user.app.climatechange.model04.OtherGhg
 
getAtmosphere() - Method in class org.primordion.user.app.climatechange.model04.Surface
 
getAtmosphere() - Method in class org.primordion.user.app.climatechange.model04.TopOfAtmosphere
 
getAtmosphere() - Method in class org.primordion.user.app.climatechange.model04.Viewable
 
getAtmosphericTemperature() - Method in class org.primordion.user.app.climatechange.igm.DownLw
 
getAtmosphericTemperature() - Method in class org.primordion.user.app.climatechange.igm.UpLw
 
getAtmosphericWindow() - Method in class org.primordion.user.app.climatechange.model04.Atmosphere
 
getAttr() - Method in class org.primordion.xholon.service.svg.SvgAttribute
 
getAttributeCount() - Method in interface org.primordion.xholon.io.xml.IXmlReader
Returns the count of attributes.
getAttributeCount() - Method in class org.primordion.xholon.io.xml.XmlGwtDomReader
 
getAttributeCount() - Method in class org.primordion.xholon.io.xml.XmlReader
 
getAttributeDoubleVal(IXholon, String) - Method in interface org.primordion.xholon.base.IReflection
Get the current value of a double attribute.
getAttributeDoubleVal(Class, String) - Method in interface org.primordion.xholon.base.IReflection
Get the current value of a double attribute.
getAttributeDoubleVal(IXholon, String) - Method in class org.primordion.xholon.base.ReflectionJavaMicro
 
getAttributeDoubleVal(Class, String) - Method in class org.primordion.xholon.base.ReflectionJavaMicro
 
getAttributeIntVal(IXholon, String) - Method in interface org.primordion.xholon.base.IReflection
Get the current value of an int attribute.
getAttributeIntVal(Class, String) - Method in interface org.primordion.xholon.base.IReflection
Get the current value of an int attribute.
getAttributeIntVal(IXholon, String) - Method in class org.primordion.xholon.base.ReflectionJavaMicro
 
getAttributeIntVal(Class, String) - Method in class org.primordion.xholon.base.ReflectionJavaMicro
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_arrayboolean
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_arraybyte
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_arraychar
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_arraydouble
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_arrayfloat
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_arrayint
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_arraylong
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_arrayObject
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_arrayshort
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_arrayString
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_boolean
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_byte
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_char
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_double
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_float
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_int
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_List
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_long
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_Map
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_Set
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_short
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute.Attribute_String
 
getAttributeJavaClass() - Method in class org.primordion.xholon.base.Attribute
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_arrayboolean
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_arraybyte
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_arraychar
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_arraydouble
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_arrayfloat
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_arrayint
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_arraylong
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_arrayObject
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_arrayshort
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_arrayString
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_boolean
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_byte
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_char
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_double
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_float
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_int
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_List
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_long
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_Map
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_Set
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_short
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute.Attribute_String
 
getAttributeJavaClassType() - Method in class org.primordion.xholon.base.Attribute
 
getAttributeName(int) - Method in interface org.primordion.xholon.io.xml.IXmlReader
Returns the name of the attribute at the provided index.
getAttributeName(int) - Method in class org.primordion.xholon.io.xml.XmlGwtDomReader
 
getAttributeName(int) - Method in class org.primordion.xholon.io.xml.XmlReader
 
getAttributeNodeXh(String) - Method in interface org.primordion.xholon.base.IXholon
 
getAttributeNodeXh(String) - Method in class org.primordion.xholon.base.Xholon
 
getAttributePostConfigAction() - Method in class org.primordion.xholon.app.Application
attributePostConfigAction
getAttributePostConfigAction() - Method in interface org.primordion.xholon.app.IApplication
 
getAttributes(IXholon) - Method in interface org.primordion.xholon.base.IReflection
Get all attributes that are accessible using a method that starts with "get".
getAttributes(IXholon) - Method in class org.primordion.xholon.base.ReflectionJavaMicro
 
getAttributeStringVal(IXholon, String) - Method in interface org.primordion.xholon.base.IReflection
XPath uses this to get the current value of a String attribute.
getAttributeStringVal(IXholon, String) - Method in class org.primordion.xholon.base.ReflectionJavaMicro
 
getAttributeStringVal_UsingGetter(Object, String) - Method in interface org.primordion.xholon.base.IReflection
Get the current value of a String attribute, using a getter.
getAttributeStringVal_UsingGetter(Object, String) - Method in class org.primordion.xholon.base.ReflectionJavaMicro
 
getAttributeSynthetic(IXholon) - Method in interface org.primordion.xholon.base.IReflection
Get the first attribute of tNode, that has the "synthetic" modifier.
getAttributeSynthetic(IXholon) - Method in class org.primordion.xholon.base.ReflectionJavaMicro
 
getAttributeValue(int) - Method in interface org.primordion.xholon.io.xml.IXmlReader
Returns the value of the attribute at the provided index.
getAttributeValue(int) - Method in class org.primordion.xholon.io.xml.XmlGwtDomReader
 
getAttributeValue(int) - Method in class org.primordion.xholon.io.xml.XmlReader
 
getAttributeXh(String) - Method in interface org.primordion.xholon.base.IXholon
 
getAttributeXh(String) - Method in class org.primordion.xholon.base.Xholon
 
getAvgVehicleKilometers() - Method in class org.primordion.user.app.Collisions.XhCollisions
 
getBackRadiation() - Method in class org.primordion.user.app.climatechange.model04.Atmosphere
 
getBackRadiationBase() - Method in class org.primordion.user.app.climatechange.model04.Atmosphere
 
getBeanBags() - Method in class org.primordion.user.app.SpringIdol.Juggler
 
getBias() - Method in class org.primordion.ctrnn.AdapSysLab.XhAbstractCtrnn
 
getBody() - Method in class org.primordion.xholon.mech.mathml.content.Annotation
 
getBonusArmies() - Method in class org.primordion.user.app.Risk.Continent
 
getBracket() - Method in class org.primordion.user.app.English2French.Transform
Get the bracket (closed or open).
getBreed() - Method in interface org.primordion.xholon.base.ITurtle
Get the turtle's breed id.
getBreed() - Method in class org.primordion.xholon.base.Turtle
 
getBugSize() - Method in class org.primordion.user.app.StupidModel.sm10.BugStupidModel10
Get the current bug size.
getBugSize() - Method in class org.primordion.user.app.StupidModel.sm11.BugStupidModel11
Get the current bug size.
getBugSize() - Method in class org.primordion.user.app.StupidModel.sm12.BugStupidModel12
Get the current bug size.
getBugSize() - Method in class org.primordion.user.app.StupidModel.sm13.BugStupidModel13
Get the current bug size.
getBugSize() - Method in class org.primordion.user.app.StupidModel.sm14.BugStupidModel14
Get the current bug size.
getBugSize() - Method in class org.primordion.user.app.StupidModel.sm15.BugStupidModel15
Get the current bug size.
getBugSize() - Method in class org.primordion.user.app.StupidModel.sm16.BugStupidModel16
Get the current bug size.
getBugSize() - Method in class org.primordion.user.app.StupidModel.sm16nl.BugStupidModel16nl
Get the current bug size.
getBugSize() - Method in class org.primordion.user.app.StupidModel.sm2.BugStupidModel2
Get the current bug size.
getBugSize() - Method in class org.primordion.user.app.StupidModel.sm3.BugStupidModel3
Get the current bug size.
getBugSize() - Method in class org.primordion.user.app.StupidModel.sm4.BugStupidModel4
Get the current bug size.
getBugSize() - Method in class org.primordion.user.app.StupidModel.sm5.BugStupidModel5
Get the current bug size.
getBugSize() - Method in class org.primordion.user.app.StupidModel.sm5tg.BugStupidModel5tg
Get the current bug size.
getBugSize() - Method in class org.primordion.user.app.StupidModel.sm6.BugStupidModel6
Get the current bug size.
getBugSize() - Method in class org.primordion.user.app.StupidModel.sm7.BugStupidModel7
Get the current bug size.
getBugSize() - Method in class org.primordion.user.app.StupidModel.sm8.BugStupidModel8
Get the current bug size.
getBugSize() - Method in class org.primordion.user.app.StupidModel.sm9.BugStupidModel9
Get the current bug size.
getBusinessDelegate() - Method in class org.primordion.user.app.MeTTTa.MeTTTaWorker
 
getButton() - Method in class org.primordion.user.app.MeTTTa.MeTTTaView
 
getBvar() - Method in class org.primordion.xholon.mech.mathml.content.Ci
Get the Xholon node that contains the bound variable.
getCalculatedMove(List) - Method in interface org.primordion.user.app.MeTTTa.IMeTTTaPojo
Get a calculated move given a collection of already played positions.
getCalculatedMove(List) - Method in class org.primordion.user.app.MeTTTa.MeTTTaBusinessDelegateLocal
 
getCalculatedMove(List) - Method in class org.primordion.user.app.MeTTTa.MeTTTaPojo
 
getCarbonateRock() - Method in class org.primordion.user.app.climatechange.carboncycle03.Flows
 
getCards() - Method in class org.primordion.user.app.Risk.GameModel
 
getCaRuleNumber() - Method in class org.primordion.user.app.Simple1d.App1dSimple
 
getCaRuleNumber() - Static method in class org.primordion.user.app.Simple1d.Xh1dSimple
Return the CA rule number.
getCatSize() - Method in class org.primordion.user.app.Bestiary.Cat
Get the current cat size.
getCatSize() - Method in class org.primordion.user.app.Bestiary.GrowingCatbehavior
Get the current bug size.
getCellSize() - Method in class org.primordion.xholon.io.GridPanel
 
getCellSize() - Method in interface org.primordion.xholon.io.IGridPanel
Get the size of a grid cell.
getChangedData() - Method in interface org.primordion.xholon.base.IObservable
Get changed data.
getChangedData() - Method in class org.primordion.xholon.base.ObservableStateMachineEntity
 
getChangedData() - Method in class org.primordion.xholon.base.ObservableXholonWithPorts
 
getChartInterval() - Method in class org.primordion.dynsys.app.leakybucket.Appleakybucket
 
getChartInterval() - Method in class org.primordion.dynsys.app.stability.Appstability
 
getChartInterval() - Method in class org.primordion.user.app.Bestiary.AppBestiary
 
getChartInterval() - Method in class org.primordion.user.app.climatechange.mdcs.m2_1mp.Appmdcs
 
getChartInterval() - Method in class org.primordion.user.app.climatechange.mdcs.m2_2mp.Appmdcs
 
getChartInterval() - Method in class org.primordion.xholon.app.Chameleon.AppChameleon
 
getChartInterval() - Method in class org.primordion.xholon.app.Furcifer.AppFurcifer
 
getChartInterval() - Method in class org.primordion.xholon.mech.petrinet.PetriNet
 
getChartViewer() - Method in class org.primordion.xholon.app.Application
 
getChartViewer() - Method in interface org.primordion.xholon.app.IApplication
 
getChildNodes(boolean) - Method in interface org.primordion.xholon.base.IXholon
Get all children of this node.
getChildNodes(boolean) - Method in class org.primordion.xholon.base.Xholon
 
getChildNodes(boolean) - Method in class org.primordion.xholon.util.XholonTreeNode
 
getChildSuperClass() - Method in interface org.primordion.xholon.base.IXholonClass
Get the optional child superClass.
getChildSuperClass() - Method in class org.primordion.xholon.base.XholonClass
 
getCircleMarker() - Method in class org.primordion.user.app.English2French.Transform
Get the circle marker.
getClass(String) - Method in class org.primordion.xholon.service.XholonCreationService
Return the class given the class name.
getClassDetailsFile() - Method in class org.primordion.xholon.app.Application
 
getClassDetailsFile() - Method in interface org.primordion.xholon.app.IApplication
 
getClassNode(String) - Method in class org.primordion.xholon.app.Application
 
getClassNode(int) - Method in class org.primordion.xholon.app.Application
 
getClassNode(int) - Method in interface org.primordion.xholon.base.IInheritanceHierarchy
Get reference to a IXholonClass node, specified by its numeric ID.
getClassNode(String) - Method in interface org.primordion.xholon.base.IInheritanceHierarchy
Get reference to a IXholonClass node, specified by its name.
getClassNode(int) - Method in class org.primordion.xholon.base.InheritanceHierarchy
 
getClassNode(String) - Method in class org.primordion.xholon.base.InheritanceHierarchy
 
getClassNode(String) - Method in interface org.primordion.xholon.base.IXholon
Get an instance of XholonClass, given its name.
getClassNode(int) - Method in interface org.primordion.xholon.base.IXholon
Get an instance of XholonClass, given its numeric id.
getClassNode(String) - Method in class org.primordion.xholon.base.Xholon
 
getClassNode(int) - Method in class org.primordion.xholon.base.Xholon
 
GETCLASSNODE_HASHTABLE - Static variable in interface org.primordion.xholon.base.IInheritanceHierarchy
Use a hash table.
GETCLASSNODE_TREESEARCH - Static variable in interface org.primordion.xholon.base.IInheritanceHierarchy
Search the entire tree starting at root.
getClassNodeHt() - Method in interface org.primordion.xholon.base.IInheritanceHierarchy
Get the internal hash table.
getClassNodeHt() - Method in class org.primordion.xholon.base.InheritanceHierarchy
 
getClosedBracket() - Method in class org.primordion.user.app.English2French.Transform