org.primordion.xholon.xmiapps
Class XhRcs_GP_FSM

java.lang.Object
  org.primordion.xholon.base.Xholon
      org.primordion.xholon.base.XholonWithPorts
          org.primordion.xholon.xmiapps.XhRcs_GP_FSM

All Implemented Interfaces:

CeRcs_GP_FSM, IXholon

public class XhRcs_GP_FSM

extends XholonWithPorts

implements CeRcs_GP_FSM

Rcs_GP_FSM application - Xholon Java

Author: KenWebb

Date: 23/05/2007

File: Rcs_GP_FSM.mdzip

Target: Xholon 0.5 http://www.primordion.com/Xholon

UML: MagicDraw UML 11.5

XMI: 2.1, Mon Mar 05 15:47:43 EST 2007

XSLT: 1, Apache Software Foundation, http://xml.apache.org/xalan-j

Field Summary

static int	Product
static int	Regulation
java.lang.String	roleName
static int	S_ACTIVATE
static int	S_DEACTIVATE
static int	Substrate
double	val

Fields inherited from class org.primordion.xholon.base.XholonWithPorts

port

Fields inherited from class org.primordion.xholon.base.Xholon

DEFAULT_LEVEL, interaction, interactionsEnabled

Fields inherited from interface org.primordion.xholon.xmiapps.CeRcs_GP_FSM

EnzymeCE, G1PCE, GlyCE, GPaseCE, GPaseSystemCE, includeCE, PKinaseCE, PolysaccharideCE, PPhosphataseCE, RcsEnzymeCE, SmallMoleculeCE, XholonClassCE

Fields inherited from interface org.primordion.xholon.base.IXholon

DEFAULT_SIZE_MSG_Q, NINCLUDE_PSC, NINCLUDE_PSx, NINCLUDE_PxC, NINCLUDE_Pxx, NINCLUDE_xSC, NINCLUDE_xSx, NINCLUDE_xxC, NINCLUDE_xxx

Constructor Summary

XhRcs_GP_FSM()

Method Summary

void	act() Do some action during this time step.
void	decVal(double decAmount) Decrement an internal double value by a specified amount.
java.lang.String	getRoleName() Get name of the role played by this Xholon within a specific context.
double	getVal() Get the value of a "double" maintained by this xholon instance.
void	incVal(double incAmount) Increment an internal double value by a specified amount.
void	initialize() Initialize the tree node.
void	performActivity(int activityId, IMessage msg) Do the UML2 Activity identified by the activityId.
boolean	performGuard(int activityId, IMessage msg) Do the UML2 Activity identified by the activityId.
void	processReceivedMessage(Message msg) Process a received ROOM/UML2 message taken from the message queue.
void	setRoleName(java.lang.String roleName) Set name of the role played by this Xholon within a specific context.
void	setVal(double amount) Set the value of a "double" maintained by this xholon instance.
java.lang.String	toString()

Methods inherited from class org.primordion.xholon.base.XholonWithPorts

configure, getMaxPorts, getPort, isActiveObject, isBound, isContainer, isPassiveObject, postConfigure, setMaxPorts, setPorts, terminate

Methods inherited from class org.primordion.xholon.base.Xholon

appendChild, appendChild, appendChild, cleanup, configure, createStructure, decVal, depth, draw, getChildNodes, getFirstChild, getFirstSibling, getId, getLastChild, getLastSibling, getName, getNeighbors, getNextId, getNextSibling, getNthChild, getNthSibling, getNumChildren, getNumSiblings, getParentNode, getPreviousSibling, getRootNode, getSiblings, getSizeMessageQ, getUid, getVal_boolean, getVal_byte, getVal_char, getVal_double, getVal_float, getVal_int, getVal_long, getVal_Object, getVal_short, getVal_String, getXhc, getXhcId, getXhcName, getXhType, handleNodeSelection, hasAncestor, hasChildNodes, hasChildOrSiblingNodes, hasNextSibling, hasParentNode, height, incVal, initStatics, inOrderPrint, insertAfter, insertBefore, insertFirstChild, isExternal, isInternal, isLeaf, isRootNode, performActivity, performBooleanActivity, performBooleanActivity, performDoubleActivity, performVoidActivity, postAct, postOrderPrint, postReconfigure, preAct, preConfigure, preOrderPrint, preReconfigure, print, println, processMessageQ, reconfigure, remove, removeChild, resetNextId, sendMessage, sendMessage, sendMessage, setAttributeVal, setFactory, setFirstChild, setId, setNextSibling, setParentChildLinks, setParentNode, setParentSiblingLinks, setSizeMessageQ, setUid, setVal, setVal, setVal, setVal, setVal, setVal, setVal, setVal, setVal, setVariableValue, setXhc, swapNode, treeSize, writeXml

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

Substrate

public static final int Substrate

See Also:

Constant Field Values

Product

public static final int Product

See Also:

Constant Field Values

Regulation

public static final int Regulation

See Also:

Constant Field Values

S_ACTIVATE

public static final int S_ACTIVATE

See Also:

Constant Field Values

S_DEACTIVATE

public static final int S_DEACTIVATE

See Also:

Constant Field Values

roleName

public java.lang.String roleName

val

public double val

Constructor Detail

XhRcs_GP_FSM

public XhRcs_GP_FSM()

Method Detail

setRoleName

public void setRoleName(java.lang.String roleName)

Description copied from interface: IXholon

Set name of the role played by this Xholon within a specific context.

Specified by:

setRoleName in interface IXholon

Overrides:

setRoleName in class Xholon

getRoleName

public java.lang.String getRoleName()

Description copied from interface: IXholon

Get name of the role played by this Xholon within a specific context.

Specified by:

getRoleName in interface IXholon

Overrides:

getRoleName in class Xholon

initialize

public void initialize()

Description copied from interface: IXholon

Initialize the tree node. Typically this is only used to re-initialize a node, such as when it is reused through the TreeNodeFactoryStatic.

Specified by:

initialize in interface IXholon

Overrides:

initialize in class XholonWithPorts

getVal

public double getVal()

Description copied from interface: IXholon

Get the value of a "double" maintained by this xholon instance. If a class that implements this interface does not maintain such a value, it should return 0.0 This method can be used in place of getVal_double()

Specified by:

getVal in interface IXholon

Overrides:

getVal in class Xholon

incVal

public void incVal(double incAmount)

Description copied from interface: IXholon

Increment an internal double value by a specified amount. This is a convenience method.

Specified by:

incVal in interface IXholon

Overrides:

incVal in class Xholon

decVal

public void decVal(double decAmount)

Description copied from interface: IXholon

Decrement an internal double value by a specified amount. This is a convenience method.

Specified by:

decVal in interface IXholon

Overrides:

decVal in class Xholon

setVal

public void setVal(double amount)

Description copied from interface: IXholon

Set the value of a "double" maintained by this xholon instance.

Specified by:

setVal in interface IXholon

Overrides:

setVal in class Xholon

act

public void act()

Description copied from interface: IXholon

Do some action during this time step. Typically all nodes in the tree will do their pre-actions (optional), then all will do their actions, and then all will do their post-actions (optional).

Specified by:

act in interface IXholon

Overrides:

act in class Xholon

processReceivedMessage

public void processReceivedMessage(Message msg)

Description copied from interface: IXholon

Process a received ROOM/UML2 message taken from the message queue. All sent messages are placed in queues before they are processed.

Specified by:

processReceivedMessage in interface IXholon

Overrides:

processReceivedMessage in class Xholon

performActivity

public void performActivity(int activityId,
                            IMessage msg)

Description copied from interface: IXholon

Do the UML2 Activity identified by the activityId. This is code called during a state Transition, or while entering, exiting, or within a State.

Specified by:

performActivity in interface IXholon

Overrides:

performActivity in class Xholon

performGuard

public boolean performGuard(int activityId,
                            IMessage msg)

Description copied from interface: IXholon

Do the UML2 Activity identified by the activityId. This is code called before a Transition from a State or Choice, to check the Guard conditions.

Specified by:

performGuard in interface IXholon

Overrides:

performGuard in class Xholon

toString

public java.lang.String toString()

Overrides:

toString in class Xholon